RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM6-205	ENST00000507449	JADE3	Q92613	823 aa		4.64	□□□□□ -1.67
LSM6-205	ENST00000507449	FERMT2	Q96AC1	680 aa		4.64	□□□□□ -1.67
LSM6-205	ENST00000507449	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.64	□□□□□ -1.67
LSM6-205	ENST00000507449	KCTD10	Q9H3F6	313 aa		4.64	□□□□□ -1.67
LSM6-205	ENST00000507449	TCF7L1	Q9HCS4	588 aa		4.64	□□□□□ -1.67
LSM6-205	ENST00000507449	DNAJC28	Q9NX36	388 aa		4.64	□□□□□ -1.67
LSM6-205	ENST00000507449	IP6K2	Q9UHH9	426 aa		4.64	□□□□□ -1.67
LSM6-205	ENST00000507449	DENND2A	Q9ULE3	1009 aa		4.64	□□□□□ -1.67
LSM6-205	ENST00000507449	LUC7L2	Q9Y383	392 aa	Known RBP	4.64	□□□□□ -1.67
LSM6-205	ENST00000507449	ETV2	O00321	342 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	MAF	O75444	373 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	OSM	P13725	252 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	MLLT6	P55198	1093 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	CD83	Q01151	205 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	SMAD4	Q13485	552 aa	Known RBP	4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	SSPN	Q14714	243 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	UGT8	Q16880	541 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	RGL3	Q3MIN7	710 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	PRR31	Q5SQ13	230 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	TMEM240	Q5SV17	173 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	CMTR2	Q8IYT2	770 aa	Known RBP	4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	CPA6	Q8N4T0	437 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	KY	Q8NBH2	561 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	TEKT5	Q96M29	485 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	SLC2A13	Q96QE2	648 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	CAMKK2	Q96RR4	588 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	PPP1R16B	Q96T49	567 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	HAPLN2	Q9GZV7	340 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	WNT8A	Q9H1J5	351 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	MTG2	Q9H4K7	406 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	MKS1	Q9NXB0	559 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	TCEAL9	Q9UHQ7	104 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	TUBD1	Q9UJT1	453 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	FAN1	Q9Y2M0	1017 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	NUMBL	Q9Y6R0	609 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449	MYPN	Q86TC9	1320 aa		4.63	□□□□□ -1.67
LSM6-205	ENST00000507449		A0A0A6YYJ9	748 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449		A0A0A6YYK5	440 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	E2F8	A0AVK6	867 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	XPOT	O43592	962 aa	Known RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	OPHN1	O60890	802 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	PCDH8	O95206	1070 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	KNG1	P01042	644 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	ZSCAN20	P17040	1043 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	C5AR1	P21730	350 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	APEX1	P27695	318 aa	Known RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	RECQL	P46063	649 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	LGALS4	P56470	323 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	ANTXR2	P58335	489 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	MRPS9	P82933	396 aa	Known RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	CLUL1	Q15846	466 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	MUM1	Q2TAK8	710 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	TTLL10	Q6ZVT0	673 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	PNMA8A	Q86V59	439 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	FAM129C	Q86XR2	697 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	AMOTL1	Q8IY63	956 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	OR5AN1	Q8NGI8	311 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	CALML6	Q8TD86	181 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	FNIP1	Q8TF40	1166 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	JPH3	Q8WXH2	748 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	ZBTB8A	Q96BR9	441 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	SOX7	Q9BT81	388 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	PCDH18	Q9HCL0	1135 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	LUC7L	Q9NQ29	371 aa	Known RBP	4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	PRSS50	Q9UI38	385 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	ZNF180	Q9UJW8	692 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	CROT	Q9UKG9	612 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	GPR45	Q9Y5Y3	372 aa		4.62	□□□□□ -1.67
LSM6-205	ENST00000507449	ST20-MTHFS	A0A0A6YYL1	179 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	KLHL33	A6NCF5	533 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	RFPL1	O75677	317 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	SNUPN	O95149	360 aa	Known RBP	4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	MED14OS	P0DP75	135 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	ZSCAN22	P10073	491 aa	Predicted RBP	4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	GLDC	P23378	1020 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	ADCY8	P40145	1251 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	CTSW	P56202	376 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	BCAR1	P56945	870 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	ACAP2	Q15057	778 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	VWA3B	Q502W6	1294 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	TMEM200B	Q69YZ2	307 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	TTLL7	Q6ZT98	887 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	GAREM2	Q75VX8	874 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	TPH2	Q8IWU9	490 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	CHPF	Q8IZ52	775 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	TTLL6	Q8N841	843 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	KCNN1	Q92952	543 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	BORCS6	Q96GS4	357 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	SIGLEC10	Q96LC7	697 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	CLIC6	Q96NY7	704 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	KCMF1	Q9P0J7	381 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	FTSJ1	Q9UET6	329 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	DPP7	Q9UHL4	492 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	EVL	Q9UI08	416 aa	Predicted RBP	4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	KCNG1	Q9UIX4	513 aa		4.61	□□□□□ -1.67
LSM6-205	ENST00000507449	MAGEL2	Q9UJ55	1249 aa		4.61	□□□□□ -1.67

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