RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PRDX5P30044 214 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 PLS1Q14651 629 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 MFSD5Q6N075 450 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 FRMD5Q7Z6J6 570 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 CCDC65Q8IXS2 484 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 BMP2KQ9NSY1 1161 aaPredicted RBP18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 THRAP3Q9Y2W1 955 aaKnown RBP18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 AFPP02771 609 aaKnown RBP18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 LINGO3P0C6S8 592 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 OLIG1Q8TAK6 271 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 RNF217Q8TC41 542 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 FGFR1OP2Q9NVK5 253 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 SEC63Q9UGP8 760 aaKnown RBP18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 AJAP1Q9UKB5 411 aaPredicted RBP18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 WFS1O76024 890 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 NR2F2P24468 414 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 PTGIRP43119 386 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 EXOC3L1Q86VI1 746 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 SLC30A5Q8TAD4 765 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 SLC35G2Q8TBE7 412 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 U2AF1L4Q8WU68 220 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 RXFP1Q9HBX9 757 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 SIX2Q9NPC8 291 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 RASAL2Q9UJF2 1139 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 WNK3Q9BYP7 1800 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 ENO4A6NNW6 628 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 RASGRF2O14827 1237 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 RIPK2O43353 540 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 SMARCA1P28370 1054 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 GBP1P32455 592 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 LACTBP83111 547 aaPredicted RBP18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 PRPF4BQ13523 1007 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 EPHA7Q15375 998 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 HYIQ5T013 277 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 AP1ARQ63HQ0 302 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 ADAT2Q7Z6V5 191 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 DHX37Q8IY37 1157 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 FITM2Q8N6M3 262 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 RFFLQ8WZ73 363 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 PLCD4Q9BRC7 762 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 PRKAG3Q9UGI9 489 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 ARMCX3Q9UH62 379 aaPredicted RBP18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 PNMA3Q9UL41 463 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 STK38LQ9Y2H1 464 aa18.49■□□□□ 0.55
SQSTM1-211ENST00000506690 TCP11X1B4DZS4 312 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 GFPT2O94808 682 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 CCNB1P14635 433 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 SLCO1A2P46721 670 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 ATP11AP98196 1134 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 CLUL1Q15846 466 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 HERC4Q5GLZ8 1057 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 SPDYE1Q8NFV5 336 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 PARD3BQ8TEW8 1205 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 PIGSQ96S52 555 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 ARL2BPQ9Y2Y0 163 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 EVI5O60447 810 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 SKIV2L2P42285 1042 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 RPL21P46778 160 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 BARGINQ6ZT62 677 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 ZNF444Q8N0Y2 327 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 LNX1Q8TBB1 728 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 ARHGEF10LQ9HCE6 1279 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 BSDC1Q9NW68 430 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 ZFATQ9P243 1243 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 DBR1Q9UK59 544 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 PCDHA3Q9Y5H8 950 aa18.48■□□□□ 0.55
SQSTM1-211ENST00000506690 TMEM253P0C7T8 217 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 MAP2K1Q02750 393 aaPredicted RBP18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 TEX9Q8N6V9 391 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 NAF1Q96HR8 494 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 MTRF1LQ9UGC7 380 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 PARP2Q9UGN5 583 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 TAF1P21675 1872 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 FESP07332 822 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 RARGP13631 454 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 FERP16591 822 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 VCAM1P19320 739 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 FGFR4P22455 802 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 DIXDC1Q155Q3 683 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 CCDC38Q502W7 563 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 USP17L2Q6R6M4 530 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 SPATA21Q7Z572 469 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 UHMK1Q8TAS1 419 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 DYDC1Q8WWB3 177 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 HAS1Q92839 578 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 C18orf8Q96DM3 657 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 ROPN1BQ9BZX4 212 aaPredicted RBP18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 CCDC113Q9H0I3 377 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 ROPN1Q9HAT0 212 aaPredicted RBP18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 TRAF3IP3Q9Y228 551 aa18.47■□□□□ 0.55
SQSTM1-211ENST00000506690 IGSF9BQ9UPX0 1349 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 NPHP3-ACAD11A0A0J9YXS1 232 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 PHF2O75151 1096 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 KLRK1P26718 216 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 ZNF211Q13398 564 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 LRRC14Q15048 493 aa18.46■□□□□ 0.55
SQSTM1-211ENST00000506690 TAF11Q15544 211 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms