RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 RUFY4Q6ZNE9 571 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 OTOP2Q7RTS6 562 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 C4orf32Q8N8J7 132 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 USP38Q8NB14 1042 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 TRAPPC12Q8WVT3 735 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 WNT8BQ93098 351 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 KCTD12Q96CX2 325 aaKnown RBP8.13□□□□□ -1.11
GYPB-206ENST00000506516 DYDC2Q96IM9 177 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 CEP170P1Q96L14 293 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 HSD17B14Q9BPX1 270 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 EIF2AK1Q9BQI3 630 aaKnown RBP8.13□□□□□ -1.11
GYPB-206ENST00000506516 ZSCAN16Q9H4T2 348 aaPredicted RBP8.13□□□□□ -1.11
GYPB-206ENST00000506516 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.13□□□□□ -1.11
GYPB-206ENST00000506516 RGL1Q9NZL6 768 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 LRWD1Q9UFC0 647 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 PPME1Q9Y570 386 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 ABHD14A-ACY1A0A1B0GW23 586 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 ZBBXA8MT70 800 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 ZBTB42B2RXF5 422 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 STX6O43752 255 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 NBNO60934 754 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 BAIAP3O94812 1187 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 STBD1O95210 358 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 C22orf31O95567 290 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 BMP15O95972 392 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 CHRNA1P02708 482 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 YWHABP31946 246 aaKnown RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 PRPHP41219 470 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 MRPS6P82932 125 aaKnown RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 CYP4A11Q02928 519 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 SPIRE1Q08AE8 756 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 CTTNQ14247 550 aaKnown RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 TARBP2Q15633 366 aaKnown RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 MTERF2Q49AM1 385 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 ODR4Q5SWX8 454 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 HAUS3Q68CZ6 603 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 TRAF7Q6Q0C0 670 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 FAM43BQ6ZT52 329 aaPredicted RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 ANO5Q75V66 913 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 FERMT3Q86UX7 667 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 KIAA0319LQ8IZA0 1049 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 SLC7A3Q8WY07 619 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 SEPT8Q92599 483 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 APBB2Q92870 758 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 ZBTB10Q96DT7 871 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 CCDC43Q96MW1 224 aaKnown RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 MAP7D2Q96T17 732 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 LXNQ9BS40 222 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 POLR3CQ9BUI4 534 aaPredicted RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 PRR14Q9BWN1 585 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 CELF4Q9BZC1 486 aaKnown RBP8.12□□□□□ -1.11
GYPB-206ENST00000506516 SUGCTQ9HAC7 445 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 TUFT1Q9NNX1 390 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 CYP26B1Q9NR63 512 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 ANKEF1Q9NU02 776 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 TRPV2Q9Y5S1 764 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 CDY2AQ9Y6F7 541 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 SLC4A7Q9Y6M7 1214 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 SQORQ9Y6N5 450 aa8.12□□□□□ -1.11
GYPB-206ENST00000506516 MAFO75444 373 aaPredicted RBP8.11□□□□□ -1.11
GYPB-206ENST00000506516 LYPLA2O95372 231 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 MUTP22033 750 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 RPA1P27694 616 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 RFC5P40937 340 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 KCNJ6P48051 423 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 CRYBB1P53674 252 aaPredicted RBP8.11□□□□□ -1.11
GYPB-206ENST00000506516 POLGP54098 1239 aaPredicted RBP8.11□□□□□ -1.11
GYPB-206ENST00000506516 SMAD3P84022 425 aaKnown RBP8.11□□□□□ -1.11
GYPB-206ENST00000506516 GUCA2AQ02747 115 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 MGAT3Q09327 533 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 TMEM62Q0P6H9 643 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 GPNMBQ14956 572 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 PLEKHG4Q58EX7 1191 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 XKR9Q5GH70 373 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 RASIP1Q5U651 963 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 KRT79Q5XKE5 535 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 ARL6IP4Q66PJ3 421 aaKnown RBP8.11□□□□□ -1.11
GYPB-206ENST00000506516 CATSPER3Q86XQ3 398 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 DBF4BQ8NFT6 615 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 PHOSPHO2Q8TCD6 241 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 HLA-CQ95604 372 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 NACC1Q96RE7 527 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 IFIH1Q9BYX4 1025 aaKnown RBP8.11□□□□□ -1.11
GYPB-206ENST00000506516 TSR3Q9UJK0 312 aaKnown RBP8.11□□□□□ -1.11
GYPB-206ENST00000506516 MTMR6Q9Y217 621 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 AKT3Q9Y243 479 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 GINS2Q9Y248 185 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 DOCK5Q9H7D0 1870 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 PDE4DIPQ5VU43 2346 aa8.11□□□□□ -1.11
GYPB-206ENST00000506516 KDM3AQ9Y4C1 1321 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 IGKV6-21A0A0C4DH24 114 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 TMEM150BA6NC51 233 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 GPR182O15218 404 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 ASAP2O43150 1006 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 ACTN4O43707 911 aaKnown RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 GAS2O43903 313 aaKnown RBP8.1□□□□□ -1.11
GYPB-206ENST00000506516 VTNP04004 478 aa8.1□□□□□ -1.11
GYPB-206ENST00000506516 GHRP10912 638 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms