RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 IL9P15248 144 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 IRS1P35568 1242 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 NEK4P51957 841 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 DLX2Q07687 328 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 TBC1D8BQ0IIM8 1120 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 NR5A1Q13285 461 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 NAALADL2Q58DX5 795 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 GTF3C6Q969F1 213 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 FAM20AQ96MK3 541 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 EPHX3Q9H6B9 360 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 CWH43Q9H720 699 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 ATP6V0A4Q9HBG4 840 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 WRAP73Q9P2S5 460 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 SEPT9Q9UHD8 586 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 CCNT1O60563 726 aaKnown RBP16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 JAK2O60674 1132 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 MAFO75444 373 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 XBP1P17861 261 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 NPEPPSP55786 919 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 PSMC5P62195 406 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 ST3GAL1Q11201 340 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 PPP2R5CQ13362 524 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 PTCRAQ6ISU1 281 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 LRRC55Q6ZSA7 311 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 EP400NLQ6ZTU2 488 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 FAM178BQ8IXR5 827 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 NSUN7Q8NE18 718 aaKnown RBP16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 POF1BQ8WVV4 589 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 CASD1Q96PB1 797 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 IGFLR1Q9H665 355 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 ELAC1Q9H777 363 aaKnown RBP16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 TMEM161AQ9NX61 479 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 CLDND1Q9NY35 253 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 PCDHGC5Q9Y5F6 944 aa16.18■□□□□ 0.18
CDC42SE2-209ENST00000506419 LINC01565O15544 149 aa16.17■□□□□ 0.18
CDC42SE2-209ENST00000506419 PLA2G4FQ68DD2 849 aa16.17■□□□□ 0.18
CDC42SE2-209ENST00000506419 ADGRD2Q7Z7M1 963 aa16.17■□□□□ 0.18
CDC42SE2-209ENST00000506419 ECHDC2Q86YB7 292 aa16.17■□□□□ 0.18
CDC42SE2-209ENST00000506419 KSR1Q8IVT5 923 aa16.17■□□□□ 0.18
CDC42SE2-209ENST00000506419 ZNF710Q8N1W2 664 aa16.17■□□□□ 0.18
CDC42SE2-209ENST00000506419 SUCLA2Q9P2R7 463 aaPredicted RBP16.17■□□□□ 0.18
CDC42SE2-209ENST00000506419 LOXHD1Q8IVV2 1947 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 A0A087WZ62 844 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 BTBD18B2RXH4 712 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 WNT7AO00755 349 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 ZBTB39O15060 712 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 TBX3O15119 743 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 P4HBP07237 508 aaKnown RBP16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 ZSCAN20P17040 1043 aaPredicted RBP16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 QARSP47897 775 aaKnown RBP16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 SPIRE1Q08AE8 756 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 ADAM15Q13444 863 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 EPHA7Q15375 998 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 ZNF598Q86UK7 904 aaKnown RBP16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 NLRP7Q8WX94 980 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 WASF1Q92558 559 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 FDXACB1Q9BRP7 624 aaPredicted RBP16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 RGL1Q9NZL6 768 aa16.16■□□□□ 0.18
CDC42SE2-209ENST00000506419 MYH9P35579 1960 aaKnown RBP16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 A0A0U1RQF3 1178 aa16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 NCK2O43639 380 aa16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 KRT2P35908 639 aa16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 ERVFC1P60507 584 aa16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 SPOUT1Q5T280 376 aaKnown RBP16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 DYDC2Q96IM9 177 aa16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 GCOM2Q9BZD3 368 aaPredicted RBP16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 TMEM117Q9H0C3 514 aa16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 CYP26B1Q9NR63 512 aa16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 RAPGEFL1Q9UHV5 662 aa16.15■□□□□ 0.18
CDC42SE2-209ENST00000506419 FGF18O76093 207 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 SLITRK3O94933 977 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 ATF7P17544 494 aaPredicted RBP16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 DNM2P50570 870 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 FOSBP53539 338 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 CDC42EP1Q00587 391 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 CLUL1Q15846 466 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 PUS10Q3MIT2 529 aaKnown RBP16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 CLLU1OSQ5K130 101 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 RHPN2Q8IUC4 686 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 GJD3Q8N144 294 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 COLGALT1Q8NBJ5 622 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 NAP1L4Q99733 375 aaKnown RBP16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 PCDHB12Q9Y5F1 795 aa16.14■□□□□ 0.17
CDC42SE2-209ENST00000506419 MARCH6O60337 910 aa16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 CTTNQ14247 550 aaKnown RBP16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 NCAPH2Q6IBW4 605 aa16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 RBM23Q86U06 439 aaKnown RBP16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 C4orf19Q8IY42 314 aa16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 DIS3L2Q8IYB7 885 aaKnown RBP16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 RNF169Q8NCN4 708 aa16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 TMEM143Q96AN5 459 aa16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 CEP170P1Q96L14 293 aa16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 DHX33Q9H6R0 707 aaKnown RBP16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 IFT122Q9HBG6 1241 aa16.13■□□□□ 0.17
CDC42SE2-209ENST00000506419 CLEC1BQ9P126 229 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms