RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 C5orf67F2Z3F1 127 aa18.81■□□□□ 0.6
PDLIM7-215ENST00000506161 MAGEB2O15479 319 aa18.81■□□□□ 0.6
PDLIM7-215ENST00000506161 SARSP49591 514 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-215ENST00000506161 XKR3Q5GH77 459 aa18.81■□□□□ 0.6
PDLIM7-215ENST00000506161 KSR1Q8IVT5 923 aa18.81■□□□□ 0.6
PDLIM7-215ENST00000506161 DIS3L2Q8IYB7 885 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-215ENST00000506161 MRPL38Q96DV4 380 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-215ENST00000506161 SAMD11Q96NU1 681 aa18.81■□□□□ 0.6
PDLIM7-215ENST00000506161 ALG13Q9NP73 1137 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-215ENST00000506161 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 FGFR1P11362 822 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 GCFC2P16383 781 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 XBP1P17861 261 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 MRE11P49959 708 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 TBC1D8BQ0IIM8 1120 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 TCEAL5Q5H9L2 206 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 CMTR2Q8IYT2 770 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 DYDC2Q96IM9 177 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 FAM20AQ96MK3 541 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 TMEM60Q9H2L4 133 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 BMP2KQ9NSY1 1161 aaPredicted RBP18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 PCDHGC5Q9Y5F6 944 aa18.8■□□□□ 0.6
PDLIM7-215ENST00000506161 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-215ENST00000506161 DARSP14868 501 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-215ENST00000506161 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.6
PDLIM7-215ENST00000506161 PSMC5P62195 406 aa18.79■□□□□ 0.6
PDLIM7-215ENST00000506161 CTTNQ14247 550 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-215ENST00000506161 NCAPH2Q6IBW4 605 aa18.79■□□□□ 0.6
PDLIM7-215ENST00000506161 WASF1Q92558 559 aa18.79■□□□□ 0.6
PDLIM7-215ENST00000506161 CD320Q9NPF0 282 aa18.79■□□□□ 0.6
PDLIM7-215ENST00000506161 LIMCH1Q9UPQ0 1083 aa18.79■□□□□ 0.6
PDLIM7-215ENST00000506161 A0A087WWV3 80 aa18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 A0A087WZ62 844 aa18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 MAFO75444 373 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 CD2BP2O95400 341 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 ITGB1P05556 798 aa18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 ATF7P17544 494 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 EIF4BP23588 611 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 IRS1P35568 1242 aa18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 FAM189BP81408 668 aa18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 CYP4A11Q02928 519 aa18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 SNX27Q96L92 541 aa18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 MAP7D2Q96T17 732 aa18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 FDXACB1Q9BRP7 624 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 LXNQ9BS40 222 aa18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 UBE2ZQ9H832 354 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-215ENST00000506161 DENND3A2RUS2 1198 aa18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 TBX3O15119 743 aa18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 GPR182O15218 404 aa18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 QARSP47897 775 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 EPHA7Q15375 998 aa18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 LRRC55Q6ZSA7 311 aa18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 SLC24A5Q71RS6 500 aa18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 CYP26B1Q9NR63 512 aa18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 PLAGL2Q9UPG8 496 aa18.77■□□□□ 0.6
PDLIM7-215ENST00000506161 TBKBP1A7MCY6 615 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 SLITRK3O94933 977 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 STAG3L1P0CL83 205 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 RBM25P49756 843 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 ADGRD2Q7Z7M1 963 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 KLHL23Q8NBE8 558 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 SPPL3Q8TCT6 385 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 NLRP7Q8WX94 980 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 MTMR9Q96QG7 549 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 CWH43Q9H720 699 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 XPNPEP1Q9NQW7 623 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 LRFN2Q9ULH4 789 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 PCDHB7Q9Y5E2 793 aa18.76■□□□□ 0.59
PDLIM7-215ENST00000506161 MEIS3P2A8K0S8 358 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 LINC01565O15544 149 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 RB1P06400 928 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 P4HBP07237 508 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 ATP2B1P20020 1258 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 KCNA5P22460 613 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 TMOD1P28289 359 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 LTBRP36941 435 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 DLX2Q07687 328 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 HYAL1Q12794 435 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 NBR1Q14596 966 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 COL19A1Q14993 1142 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 CLLU1OSQ5K130 101 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 ECHDC2Q86YB7 292 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 RHPN2Q8IUC4 686 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 C4orf19Q8IY42 314 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 GJD3Q8N144 294 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 TMEM143Q96AN5 459 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 CASD1Q96PB1 797 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 EIF2AK1Q9BQI3 630 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 DHX33Q9H6R0 707 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 MINDY3Q9H8M7 445 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 IFT122Q9HBG6 1241 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 C1orf112Q9NSG2 853 aa18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 SUCLA2Q9P2R7 463 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-215ENST00000506161 POTEMA6NI47 508 aa18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 H3BQ06 376 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 PBX3P40426 434 aa18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 CALCRLQ16602 461 aa18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 ZNF598Q86UK7 904 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-215ENST00000506161 CEP170P1Q96L14 293 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms