RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 SCG2P13521 617 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 PORP16435 677 aaPredicted RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 TMEM11P17152 192 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 ATP5OP48047 213 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 RBM6P78332 1123 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 ERV3-1Q14264 604 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 STARD3Q14849 445 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 GEN1Q17RS7 908 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 C11orf88Q6PI97 169 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 TTLL7Q6ZT98 887 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 CCDC84Q86UT8 332 aaPredicted RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 GRAMD1CQ8IYS0 662 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 PRR18Q8N4B5 295 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 CCDC33Q8N5R6 958 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 TNIP2Q8NFZ5 429 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 TMEM41AQ96HV5 264 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 SCLYQ96I15 445 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 TEKT5Q96M29 485 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 WDR24Q96S15 920 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 TM9SF2Q99805 663 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 AARSD1Q9BTE6 412 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 TMEM60Q9H2L4 133 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 KRT84Q9NSB2 600 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 DDX18Q9NVP1 670 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 CHORDC1Q9UHD1 332 aaPredicted RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 FNDC3AQ9Y2H6 1198 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 SOAT2O75908 522 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 SEC24BO95487 1268 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 C6orf222P0C671 652 aaPredicted RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 SRGAP2BP0DMP2 458 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 TNNT1P13805 278 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 HNRNPLP14866 589 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDH9-202ENST00000505020 MSH2P43246 934 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 POLD2P49005 469 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 RPS26P62854 115 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 CCNA1P78396 465 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 TFCP2Q12800 502 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 SART3Q15020 963 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 PKN1Q16512 942 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 ZNF674Q2M3X9 581 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 CEP55Q53EZ4 464 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 INTS6LQ5JSJ4 861 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 IFFO2Q5TF58 517 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 PIK3R6Q5UE93 754 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 RNF220Q5VTB9 566 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 LRCH2Q5VUJ6 765 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 MCTP1Q6DN14 999 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 LILRA6Q6PI73 481 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 TMEM110Q86TL2 294 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 CCDC24Q8N4L8 307 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 GOLGA6L1Q8N7Z2 621 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 RASSF8Q8NHQ8 419 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 FATE1Q969F0 183 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 NAF1Q96HR8 494 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 MAELQ96JY0 434 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 DHRS1Q96LJ7 313 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 CEP44Q9C0F1 390 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 NUP62CLQ9H1M0 184 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 TBCCD1Q9NVR7 557 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 ZC3H7BQ9UGR2 993 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 MRPL11Q9Y3B7 192 aaKnown RBP7.89□□□□□ -1.15
CDH9-202ENST00000505020 KIF3AQ9Y496 699 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 AP1M2Q9Y6Q5 423 aa7.89□□□□□ -1.15
CDH9-202ENST00000505020 FAM86C2PA6NEL3 165 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 F8VZ95 297 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 POLR3GO15318 223 aaPredicted RBP7.88□□□□□ -1.15
CDH9-202ENST00000505020 PRODHO43272 600 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 DAPK3O43293 454 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 DDHD2O94830 711 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 EPN2O95208 641 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 HSPA1AP0DMV8 641 aaKnown RBP7.88□□□□□ -1.15
CDH9-202ENST00000505020 HSPA1BP0DMV9 641 aaKnown RBP7.88□□□□□ -1.15
CDH9-202ENST00000505020 FGFR1P11362 822 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 FXR1P51114 621 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDH9-202ENST00000505020 SLC26A5P58743 744 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 IMMTQ16891 758 aaKnown RBP7.88□□□□□ -1.15
CDH9-202ENST00000505020 HSF5Q4G112 596 aaPredicted RBP7.88□□□□□ -1.15
CDH9-202ENST00000505020 TXNDC11Q6PKC3 985 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 APOA5Q6Q788 366 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 UNC5AQ6ZN44 842 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 UBE2R2Q712K3 238 aaPredicted RBP7.88□□□□□ -1.15
CDH9-202ENST00000505020 LRRC49Q8IUZ0 686 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 CPOQ8IVL8 374 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 CMTR1Q8N1G2 835 aaKnown RBP7.88□□□□□ -1.15
CDH9-202ENST00000505020 GSTCDQ8NEC7 633 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 KLHL6Q8WZ60 621 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 RFFLQ8WZ73 363 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 CEP295NLQ96MC4 621 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 C7orf26Q96N11 449 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 ZPBPQ9BS86 351 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 MMTAG2Q9BU76 263 aaKnown RBP7.88□□□□□ -1.15
CDH9-202ENST00000505020 PREBQ9HCU5 417 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 TMPRSS4Q9NRS4 437 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 CORO2BQ9UQ03 480 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 POLR3KQ9Y2Y1 108 aaPredicted RBP7.88□□□□□ -1.15
CDH9-202ENST00000505020 TACC3Q9Y6A5 838 aa7.88□□□□□ -1.15
CDH9-202ENST00000505020 A0A0B4J269 797 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 RHPN2P1A8MT19 583 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms