RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 RHOBTB2Q9BYZ6 727 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.01□□□□□ -1.61
RFC1-208ENST00000504849 TCF7L1Q9HCS4 588 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 TRHDEQ9UKU6 1024 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 PNMA2Q9UL42 364 aa5.01□□□□□ -1.61
RFC1-208ENST00000504849 PRDM15P57071 1507 aaPredicted RBP5.01□□□□□ -1.61
RFC1-208ENST00000504849 CCDC141Q6ZP82 1450 aa5□□□□□ -1.61
RFC1-208ENST00000504849 PIK3C2GO75747 1445 aa5□□□□□ -1.61
RFC1-208ENST00000504849 SCAPERQ9BY12 1400 aa5□□□□□ -1.61
RFC1-208ENST00000504849 A0A1W2PQJ5 194 aa5□□□□□ -1.61
RFC1-208ENST00000504849 K7ESF4 209 aa5□□□□□ -1.61
RFC1-208ENST00000504849 OPA1O60313 960 aa5□□□□□ -1.61
RFC1-208ENST00000504849 F2P00734 622 aa5□□□□□ -1.61
RFC1-208ENST00000504849 ITGAVP06756 1048 aa5□□□□□ -1.61
RFC1-208ENST00000504849 PTMSP20962 102 aa5□□□□□ -1.61
RFC1-208ENST00000504849 INHBCP55103 352 aa5□□□□□ -1.61
RFC1-208ENST00000504849 FAPQ12884 760 aa5□□□□□ -1.61
RFC1-208ENST00000504849 PCBP1Q15365 356 aaKnown RBP eCLIP5□□□□□ -1.61
RFC1-208ENST00000504849 CC2D1BQ5T0F9 858 aaKnown RBP5□□□□□ -1.61
RFC1-208ENST00000504849 HEATR6Q6AI08 1181 aaKnown RBP5□□□□□ -1.61
RFC1-208ENST00000504849 DPY19L2P1Q6NXN4 242 aa5□□□□□ -1.61
RFC1-208ENST00000504849 CLEC4GQ6UXB4 293 aa5□□□□□ -1.61
RFC1-208ENST00000504849 LHFPL2Q6ZUX7 228 aa5□□□□□ -1.61
RFC1-208ENST00000504849 UBE2R2Q712K3 238 aaPredicted RBP5□□□□□ -1.61
RFC1-208ENST00000504849 BRAPQ7Z569 592 aa5□□□□□ -1.61
RFC1-208ENST00000504849 ZNF227Q86WZ6 799 aa5□□□□□ -1.61
RFC1-208ENST00000504849 KIF18BQ86Y91 864 aa5□□□□□ -1.61
RFC1-208ENST00000504849 NME8Q8N427 588 aa5□□□□□ -1.61
RFC1-208ENST00000504849 NLGN2Q8NFZ4 835 aa5□□□□□ -1.61
RFC1-208ENST00000504849 OR2W6PQ8NHA6 318 aa5□□□□□ -1.61
RFC1-208ENST00000504849 SLC7A14Q8TBB6 771 aa5□□□□□ -1.61
RFC1-208ENST00000504849 JPH3Q8WXH2 748 aaPredicted RBP5□□□□□ -1.61
RFC1-208ENST00000504849 OSBP2Q969R2 916 aa5□□□□□ -1.61
RFC1-208ENST00000504849 ZNF512BQ96KM6 892 aaPredicted RBP5□□□□□ -1.61
RFC1-208ENST00000504849 HAUS7Q99871 368 aa5□□□□□ -1.61
RFC1-208ENST00000504849 ORAI3Q9BRQ5 295 aa5□□□□□ -1.61
RFC1-208ENST00000504849 MTFR1LQ9H019 292 aa5□□□□□ -1.61
RFC1-208ENST00000504849 CCDC8Q9H0W5 538 aaPredicted RBP5□□□□□ -1.61
RFC1-208ENST00000504849 PANK3Q9H999 370 aa5□□□□□ -1.61
RFC1-208ENST00000504849 OBP2AQ9NY56 170 aa5□□□□□ -1.61
RFC1-208ENST00000504849 SUCOQ9UBS9 1254 aaKnown RBP5□□□□□ -1.61
RFC1-208ENST00000504849 ISY1Q9ULR0 285 aaKnown RBP5□□□□□ -1.61
RFC1-208ENST00000504849 KNSTRNQ9Y448 316 aa5□□□□□ -1.61
RFC1-208ENST00000504849 TNPO3Q9Y5L0 923 aaKnown RBP5□□□□□ -1.61
RFC1-208ENST00000504849 FAM135AQ9P2D6 1515 aa5□□□□□ -1.61
RFC1-208ENST00000504849 TRPM1Q7Z4N2 1603 aa5□□□□□ -1.61
RFC1-208ENST00000504849 NKTRP30414 1462 aaKnown RBP5□□□□□ -1.61
RFC1-208ENST00000504849 PPRC1Q5VV67 1664 aaKnown RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 ABCC2Q92887 1545 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 GOLGA6L3A6NEY3 463 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 PRODHO43272 600 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 FRAT2O75474 233 aaPredicted RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 APPP05067 770 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 IFIT2P09913 472 aaKnown RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 NBPF7P0C2Y1 421 aaPredicted RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 C6orf222P0C671 652 aaPredicted RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 CYP2C8P10632 490 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 PHKG2P15735 406 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 POLR2BP30876 1174 aaKnown RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 HTR3AP46098 478 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 RGS3P49796 1198 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 TMPRSS15P98073 1019 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 PICALMQ13492 652 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 SEPT7Q16181 437 aaKnown RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 TMEM95Q3KNT9 176 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 C10orf62Q5T681 223 aaPredicted RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 GLCCI1Q86VQ1 547 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 LDLRAD3Q86YD5 345 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 CRACR2BQ8N4Y2 399 aaPredicted RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 E2F7Q96AV8 911 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 SARGQ9BW04 601 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 SLC13A1Q9BZW2 595 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 GBP3Q9H0R5 595 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 MEGF9Q9H1U4 602 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 SLC52A2Q9HAB3 445 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 NDOR1Q9UHB4 597 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 ANAPC4Q9UJX5 808 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 PNMA8BQ9ULN7 279 aaPredicted RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 NOB1Q9ULX3 412 aaKnown RBP4.99□□□□□ -1.61
RFC1-208ENST00000504849 NPC1L1Q9UHC9 1359 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 GRIN2AQ12879 1464 aa4.99□□□□□ -1.61
RFC1-208ENST00000504849 TNKSO95271 1327 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 ANO9A1A5B4 782 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 FAM86C2PA6NEL3 165 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 C9orf118A6NHY6 69 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 DDX3XO00571 662 aaKnown RBP eCLIP4.98□□□□□ -1.61
RFC1-208ENST00000504849 FGF10O15520 208 aaPredicted RBP4.98□□□□□ -1.61
RFC1-208ENST00000504849 KPNA6O60684 536 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 EPHX1P07099 455 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 JMJD7P0C870 316 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 PYGMP11217 842 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 PPP2R1AP30153 589 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 SCNN1BP51168 640 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 SLFN5Q08AF3 891 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 GRAMD1BQ3KR37 738 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 CFAP100Q494V2 611 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 MINDY4Q4G0A6 757 aa4.98□□□□□ -1.61
RFC1-208ENST00000504849 ACBD5Q5T8D3 534 aaPredicted RBP4.98□□□□□ -1.61
RFC1-208ENST00000504849 POMZP3Q6PJE2 187 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms