RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 NEUROD6Q96NK8 337 aa9.1□□□□□ -0.95
UBE2B-204ENST00000504431 CDC6Q99741 560 aa9.1□□□□□ -0.95
UBE2B-204ENST00000504431 FITM1A5D6W6 292 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 F8W031 263 aaPredicted RBP9.09□□□□□ -0.95
UBE2B-204ENST00000504431 TBX1O43435 398 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 CIAO1O76071 339 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 ZGLP1P0C6A0 271 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 VEGFAP15692 232 aaPredicted RBP9.09□□□□□ -0.95
UBE2B-204ENST00000504431 FGFR2P21802 821 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 HIBADHP31937 336 aaKnown RBP9.09□□□□□ -0.95
UBE2B-204ENST00000504431 GDNFP39905 211 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 GFRA1P56159 465 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 CHAF1AQ13111 956 aaPredicted RBP9.09□□□□□ -0.95
UBE2B-204ENST00000504431 UBE4AQ14139 1066 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 ATP2B3Q16720 1220 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 TMEM67Q5HYA8 995 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 HLA-DQA1Q5Y7H0 255 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 DLK2Q6UY11 383 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 COPS5Q92905 334 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 PTCHD1Q96NR3 888 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 LGR4Q9BXB1 951 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 COA1Q9GZY4 146 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 VPS33BQ9H267 617 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 ADAMTS10Q9H324 1103 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 RC3H2Q9HBD1 1191 aaKnown RBP9.09□□□□□ -0.95
UBE2B-204ENST00000504431 ERVK13-1Q9NX77 482 aa9.09□□□□□ -0.95
UBE2B-204ENST00000504431 SCAF8Q9UPN6 1271 aaKnown RBP9.09□□□□□ -0.95
UBE2B-204ENST00000504431 WDR90Q96KV7 1748 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 DNAJC25-GNG10A0A024R161 153 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 ADCY3O60266 1144 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 RNASE1P07998 156 aaKnown RBP9.08□□□□□ -0.96
UBE2B-204ENST00000504431 VIL1P09327 827 aaKnown RBP9.08□□□□□ -0.96
UBE2B-204ENST00000504431 PAMP19021 973 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 EPHX2P34913 555 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 PHKA1P46020 1223 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 TNIP1Q15025 636 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 PUM3Q15397 648 aaKnown RBP9.08□□□□□ -0.96
UBE2B-204ENST00000504431 TBC1D10BQ4KMP7 808 aaPredicted RBP9.08□□□□□ -0.96
UBE2B-204ENST00000504431 RALGPS1Q5JS13 557 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 DACT2Q5SW24 774 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 E4F1Q66K89 784 aaPredicted RBP9.08□□□□□ -0.96
UBE2B-204ENST00000504431 TTLL5Q6EMB2 1281 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 IQCEQ6IPM2 695 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 NSMFQ6X4W1 530 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 ZNF804AQ7Z570 1209 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 SCUBE1Q8IWY4 988 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 C16orf71Q8IYS4 520 aaPredicted RBP9.08□□□□□ -0.96
UBE2B-204ENST00000504431 CERS5Q8N5B7 392 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 LINC01599Q8WXQ3 324 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 MCMBPQ9BTE3 642 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 TAF1DQ9H5J8 278 aaPredicted RBP9.08□□□□□ -0.96
UBE2B-204ENST00000504431 IL1RAPL2Q9NP60 686 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 PRDM7Q9NQW5 492 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 MBNL3Q9NUK0 354 aaKnown RBP9.08□□□□□ -0.96
UBE2B-204ENST00000504431 CNOT7Q9UIV1 285 aaKnown RBP9.08□□□□□ -0.96
UBE2B-204ENST00000504431 HACL1Q9UJ83 578 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 PCDHAC2Q9Y5I4 1007 aa9.08□□□□□ -0.96
UBE2B-204ENST00000504431 ASTN2O75129 1339 aaPredicted RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 POLR2AP24928 1970 aaKnown RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 A0A1B0GUL7 405 aa9.07□□□□□ -0.96
UBE2B-204ENST00000504431 PRODHO43272 600 aa9.07□□□□□ -0.96
UBE2B-204ENST00000504431 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 FRAT2O75474 233 aaPredicted RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 CAPNS1P04632 268 aa9.07□□□□□ -0.96
UBE2B-204ENST00000504431 IFIT1P09914 478 aaKnown RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 PABPC1P11940 636 aaKnown RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 SLC5A1P13866 664 aa9.07□□□□□ -0.96
UBE2B-204ENST00000504431 C15orf52Q6ZUT6 534 aaKnown RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 ABI1Q8IZP0 508 aa9.07□□□□□ -0.96
UBE2B-204ENST00000504431 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
UBE2B-204ENST00000504431 TDRD7Q8NHU6 1098 aaKnown RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 SH3TC2Q8TF17 1288 aa9.07□□□□□ -0.96
UBE2B-204ENST00000504431 LPIN2Q92539 896 aa9.07□□□□□ -0.96
UBE2B-204ENST00000504431 CCDC8Q9H0W5 538 aaPredicted RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 GPRC5DQ9NZD1 345 aa9.07□□□□□ -0.96
UBE2B-204ENST00000504431 ZNF646O15015 1829 aaPredicted RBP9.07□□□□□ -0.96
UBE2B-204ENST00000504431 SCN4AP35499 1836 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 PSME4Q14997 1843 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 TRBV23-1A0A0A0MS06 115 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 NPHP3-ACAD11A0A0J9YXS1 232 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 A0A1W2PQ45 241 aaPredicted RBP9.06□□□□□ -0.96
UBE2B-204ENST00000504431 A0A1W2PQY0 241 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 MEFVO15553 781 aaPredicted RBP9.06□□□□□ -0.96
UBE2B-204ENST00000504431 FAM153BP0C7A2 387 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 IL1R1P14778 569 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 ECI1P42126 302 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 HK2P52789 917 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 SUMO1P63165 101 aaKnown RBP9.06□□□□□ -0.96
UBE2B-204ENST00000504431 CAVIN4Q5BKX8 364 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 ACBD5Q5T8D3 534 aaPredicted RBP9.06□□□□□ -0.96
UBE2B-204ENST00000504431 JAMLQ86YT9 394 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 RPAP2Q8IXW5 612 aaPredicted RBP9.06□□□□□ -0.96
UBE2B-204ENST00000504431 LILRA2Q8N149 483 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 EAF2Q96CJ1 260 aaPredicted RBP9.06□□□□□ -0.96
UBE2B-204ENST00000504431 G6PC3Q9BUM1 346 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 ADAMTS6Q9UKP5 1117 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 NOP58Q9Y2X3 529 aaKnown RBP9.06□□□□□ -0.96
UBE2B-204ENST00000504431 PTCH2Q9Y6C5 1203 aa9.06□□□□□ -0.96
UBE2B-204ENST00000504431 ADAMTSL1Q8N6G6 1762 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms