RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 MAP7D2Q96T17 732 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 POLR3FQ9H1D9 316 aaPredicted RBP15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 PARVGQ9HBI0 331 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 GPRC5CQ9NQ84 441 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 LARSQ9P2J5 1176 aaKnown RBP15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 SUCLA2Q9P2R7 463 aaPredicted RBP15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 SEL1LQ9UBV2 794 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 FRMPD3Q5JV73 1810 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 SMIM35A0A1B0GVV1 85 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 RSPH10B2B2RC85 870 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 ARVCFO00192 962 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 BIN1O00499 593 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 TREHO43280 583 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 RSPH10BP0C881 870 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 PLS3P13797 630 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 ARL2P36404 184 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 ZNF131P52739 623 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 SOX10P56693 466 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 RTP1P59025 263 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 ZNF200P98182 395 aaPredicted RBP15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 COASYQ13057 564 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 MAPK7Q13164 816 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 PSMD2Q13200 908 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 HIC1Q14526 733 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 MXD4Q14582 209 aaPredicted RBP15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 PPP2R5AQ15172 486 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 ZSCAN23Q3MJ62 389 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 ODR4Q5SWX8 454 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 GDF6Q6KF10 455 aaPredicted RBP15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 DAW1Q8N136 415 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 SLC43A3Q8NBI5 491 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 PRPF31Q8WWY3 499 aaKnown RBP15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 PSPC1Q8WXF1 523 aaKnown RBP15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 ZBTB10Q96DT7 871 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 C17orf75Q9HAS0 396 aa15.32■□□□□ 0.04
CYSTM1-202ENST00000504227 FRMD3A2A2Y4 597 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 ASAP2O43150 1006 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 RHOBTB3O94955 611 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 MNX1P50219 401 aaPredicted RBP15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 CLCN3P51790 818 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 SMTNP53814 917 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 CDC42EP1Q00587 391 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 DMP1Q13316 513 aaPredicted RBP15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 MKRN4PQ13434 485 aaPredicted RBP15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 PTGISQ16647 500 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 TAF2Q6P1X5 1199 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 SFR1Q86XK3 245 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 KIAA0319LQ8IZA0 1049 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 LINC01465Q8N7H1 131 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 TRIML1Q8N9V2 468 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 FAM49AQ9H0Q0 323 aaPredicted RBP15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 MAN1B1Q9UKM7 699 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 NOD1Q9Y239 953 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 AKT3Q9Y243 479 aa15.31■□□□□ 0.04
CYSTM1-202ENST00000504227 SYCE3A1L190 88 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 CCDC169A6NNP5 214 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 RPLP2P05387 115 aaKnown RBP15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 CDK7P50613 346 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 PEX3P56589 373 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 LAMTOR4Q0VGL1 99 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 MORC3Q14149 939 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 TFDP1Q14186 410 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 ISM2Q6H9L7 571 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 SLC39A5Q6ZMH5 540 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 RUFY4Q6ZNE9 571 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 NECAB2Q7Z6G3 386 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 RSPH3Q86UC2 560 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 FAM178BQ8IXR5 827 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 NME8Q8N427 588 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 SLC17A8Q8NDX2 589 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 ASAP3Q8TDY4 903 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 C11orf49Q9H6J7 331 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 MRPL44Q9H9J2 332 aaKnown RBP15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 TBC1D7Q9P0N9 293 aa15.3■□□□□ 0.04
CYSTM1-202ENST00000504227 ARID2Q68CP9 1835 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 SRGAP2CP0DJJ0 459 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 MAPTP10636 758 aaKnown RBP15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 COL6A1P12109 1028 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 GLRA2P23416 452 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 NAMPTP43490 491 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 ATN1P54259 1190 aaPredicted RBP15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 EHHADHQ08426 723 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 PTK7Q13308 1070 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 DRP2Q13474 957 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 ZNF658Q5TYW1 1059 aaPredicted RBP15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 STXBP4Q6ZWJ1 553 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 SERINC5Q86VE9 423 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 RHPN2Q8IUC4 686 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 ZNF710Q8N1W2 664 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 DEPTORQ8TB45 409 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 DIS3LQ8TF46 1054 aaKnown RBP15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 SPIRE2Q8WWL2 714 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 BSNDQ8WZ55 320 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 PAWRQ96IZ0 340 aaKnown RBP15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 SLC39A2Q9NP94 309 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 OLFML3Q9NRN5 406 aa15.29■□□□□ 0.04
CYSTM1-202ENST00000504227 TRMT13Q9NUP7 481 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms