RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SRRM1Q8IYB3 904 aaKnown RBP3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 SH3RF2Q8TEC5 729 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 ATXN2LQ8WWM7 1075 aaKnown RBP3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 GFM2Q969S9 779 aaKnown RBP3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 TCF25Q9BQ70 676 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 IER2Q9BTL4 223 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 BTBD7Q9P203 1132 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 DLX3O60479 287 aa3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 LAG3P18627 525 aa3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 STAT5BP51692 787 aa3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 PPP2R2AP63151 447 aa3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 ATP2C1P98194 919 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 FOXF2Q12947 444 aa3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 DCAF17Q5H9S7 520 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 FKBP15Q5T1M5 1219 aa3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 Q6YL49 198 aa3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 MAMDC2Q7Z304 686 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 MDGA1Q8NFP4 955 aa3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 CALML6Q8TD86 181 aa3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 R3HCC1Q9Y3T6 440 aaKnown RBP3.36□□□□□ -1.87
HMGB3P17-201ENST00000504195 TCRBV5S4A2TA0A5A2 114 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 GOLGA8BA8MQT2 603 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 TRIM24O15164 1050 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 GJB6O95452 261 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 NR4A1P22736 598 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 ETFBP38117 255 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 ADAM15Q13444 863 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 HSP90AA2PQ14568 343 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 SLC10A6Q3KNW5 377 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 MRM1Q6IN84 353 aaKnown RBP3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 STYK1Q6J9G0 422 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 CRELD2Q6UXH1 353 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 ARHGAP36Q6ZRI8 547 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 GCDHQ92947 438 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 COQ10AQ96MF6 247 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 FAM193BQ96PV7 902 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 AMNQ9BXJ7 453 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 ADGRE3Q9BY15 652 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 IPPKQ9H8X2 491 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 KIAA1522Q9P206 1035 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 SALL3Q9BXA9 1300 aa3.35□□□□□ -1.87
HMGB3P17-201ENST00000504195 A0A1W2PQU0 124 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 PRAMEF25A6NGN4 478 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 GRXCR1A8MXD5 290 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 GSTA4O15217 222 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 CLASP2O75122 1294 aaKnown RBP3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 GYPEP15421 78 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 APEX1P27695 318 aaKnown RBP3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 ERCC5P28715 1186 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 MC4RP32245 332 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 GRIA2P42262 883 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 LCORLQ8N3X6 602 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 SLC9A6Q92581 669 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 ANKS1AQ92625 1134 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 CAVIN3Q969G5 261 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 PGBD4Q96DM1 585 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 MYEOVQ96EZ4 313 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 C1QTNF7Q9BXJ2 289 aa3.34□□□□□ -1.87
HMGB3P17-201ENST00000504195 UBE2QL1A1L167 161 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 IQCA1LA6NCM1 817 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 WNT9AO14904 365 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 ZNF185O15231 689 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 KCNAB3O43448 404 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 MPIG6BO95866 241 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 C4BPAP04003 597 aaKnown RBP3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 CXCR5P32302 372 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 ZEB1P37275 1124 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 PTH2RP49190 550 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 BPIFB4P59827 614 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 BLOC1S1P78537 153 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 PAK1Q13153 545 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 METTL24Q5JXM2 366 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 IQSEC1Q6DN90 963 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 KCNT2Q6UVM3 1135 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 C1QL2Q7Z5L3 287 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 SGSM3Q96HU1 749 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 RPL10LQ96L21 214 aaKnown RBP3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 ZNF778Q96MU6 729 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 GPHA2Q96T91 129 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 LRFN3Q9BTN0 628 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 SERHL2Q9H4I8 314 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 ZNF408Q9H9D4 720 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 IL23AQ9NPF7 189 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 UCKL1Q9NWZ5 548 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 RCAN3Q9UKA8 241 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 SORCS3Q9UPU3 1222 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 ASB1Q9Y576 335 aa3.33□□□□□ -1.88
HMGB3P17-201ENST00000504195 POLR2AP24928 1970 aaKnown RBP3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 UNCXA6NJT0 531 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 MAN2B1O00754 1011 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 FGFR1P11362 822 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 NAT1P18440 290 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 GNAT2P19087 354 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 NHLH1Q02575 133 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 ARID5AQ03989 594 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 C1QL3Q5VWW1 255 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 LRSAM1Q6UWE0 723 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 ELOA2Q8IYF1 753 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 ANKRD53Q8N9V6 530 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms