RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 ANKRD53Q8N9V6 530 aa3.71□□□□□ -1.82
SGMS1-205ENST00000498514 HIPK4Q8NE63 616 aa3.71□□□□□ -1.82
SGMS1-205ENST00000498514 GBP4Q96PP9 640 aa3.71□□□□□ -1.82
SGMS1-205ENST00000498514 SYNPO2LQ9H987 977 aa3.71□□□□□ -1.82
SGMS1-205ENST00000498514 CYP4F11Q9HBI6 524 aa3.71□□□□□ -1.82
SGMS1-205ENST00000498514 SMURF1Q9HCE7 757 aa3.71□□□□□ -1.82
SGMS1-205ENST00000498514 PCDHA8Q9Y5H6 950 aa3.71□□□□□ -1.82
SGMS1-205ENST00000498514 RBM8AQ9Y5S9 174 aaKnown RBP3.71□□□□□ -1.82
SGMS1-205ENST00000498514 HS3ST4Q9Y661 456 aa3.71□□□□□ -1.82
SGMS1-205ENST00000498514 C2orf78A6NCI8 922 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 SRGAP2CP0DJJ0 459 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 NAT1P18440 290 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 NR4A1P22736 598 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 LACTBP83111 547 aaPredicted RBP3.7□□□□□ -1.82
SGMS1-205ENST00000498514 TAP1Q03518 808 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 TCIRG1Q13488 830 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 TIGD2Q4W5G0 525 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 EPHA10Q5JZY3 1008 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 BEND2Q8NDZ0 799 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 PTPRN2Q92932 1015 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.7□□□□□ -1.823e-7■□□□□ 10.7
SGMS1-205ENST00000498514 ZNF408Q9H9D4 720 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 SAE1Q9UBE0 346 aaPredicted RBP3.7□□□□□ -1.82
SGMS1-205ENST00000498514 DENND2AQ9ULE3 1009 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 ASB1Q9Y576 335 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 COX11Q9Y6N1 276 aa3.7□□□□□ -1.82
SGMS1-205ENST00000498514 CCDC66A2RUB6 948 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 GOLGA6L22H0YM25 854 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 ARVCFO00192 962 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 SCDO00767 359 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 FOXP2O15409 715 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 IPO13O94829 963 aaKnown RBP3.69□□□□□ -1.82
SGMS1-205ENST00000498514 DNM2P50570 870 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 ADAM8P78325 824 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 DDR2Q16832 855 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 GAGE13Q4V321 117 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 PLEKHG4Q58EX7 1191 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 TMCO4Q5TGY1 634 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 NBPF6Q5VWK0 638 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 C1QL3Q5VWW1 255 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 PAPD7Q5XG87 772 aaKnown RBP3.69□□□□□ -1.82
SGMS1-205ENST00000498514 RD3Q7Z3Z2 195 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 LRRC47Q8N1G4 583 aaKnown RBP3.69□□□□□ -1.82
SGMS1-205ENST00000498514 CELF2-AS1Q8N7Q2 184 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 MDGA1Q8NFP4 955 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 NBPF4Q96M43 638 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 IL23AQ9NPF7 189 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 KCNH7Q9NS40 1196 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 RCAN3Q9UKA8 241 aa3.69□□□□□ -1.82
SGMS1-205ENST00000498514 GRXCR1A8MXD5 290 aa3.68□□□□□ -1.82
SGMS1-205ENST00000498514 RECQL4O94761 1208 aa3.68□□□□□ -1.82
SGMS1-205ENST00000498514 NAIF1Q69YI7 327 aaPredicted RBP3.68□□□□□ -1.82
SGMS1-205ENST00000498514 ZC3H7AQ8IWR0 971 aaKnown RBP3.68□□□□□ -1.82
SGMS1-205ENST00000498514 MB21D1Q8N884 522 aa3.68□□□□□ -1.82
SGMS1-205ENST00000498514 ST13P5Q8NFI4 369 aaPredicted RBP3.68□□□□□ -1.82
SGMS1-205ENST00000498514 CPT1CQ8TCG5 803 aa3.68□□□□□ -1.82
SGMS1-205ENST00000498514 ARL8AQ96BM9 186 aa3.68□□□□□ -1.82
SGMS1-205ENST00000498514 MAGEL2Q9UJ55 1249 aa3.68□□□□□ -1.82
SGMS1-205ENST00000498514 SORCS3Q9UPU3 1222 aa3.68□□□□□ -1.82
SGMS1-205ENST00000498514 RASSF10A6NK89 507 aa3.67□□□□□ -1.82
SGMS1-205ENST00000498514 CLK3P49761 638 aaKnown RBP3.67□□□□□ -1.82
SGMS1-205ENST00000498514 TM4SF20Q53R12 229 aa3.67□□□□□ -1.82
SGMS1-205ENST00000498514 ZNF362Q5T0B9 420 aaPredicted RBP3.67□□□□□ -1.82
SGMS1-205ENST00000498514 KRT40Q6A162 431 aa3.67□□□□□ -1.82
SGMS1-205ENST00000498514 NOSTRINQ8IVI9 506 aa3.67□□□□□ -1.82
SGMS1-205ENST00000498514 PLA2G15Q8NCC3 412 aa3.67□□□□□ -1.82
SGMS1-205ENST00000498514 HNRNPLLQ8WVV9 542 aaKnown RBP3.67□□□□□ -1.82
SGMS1-205ENST00000498514 C16orf92Q96LL3 132 aa3.67□□□□□ -1.82
SGMS1-205ENST00000498514 ZNF512Q96ME7 567 aaPredicted RBP3.67□□□□□ -1.82
SGMS1-205ENST00000498514 FAM193BQ96PV7 902 aaPredicted RBP3.67□□□□□ -1.82
SGMS1-205ENST00000498514 R3HDMLQ9H3Y0 253 aa3.67□□□□□ -1.82
SGMS1-205ENST00000498514 PCDHA9Q9Y5H5 950 aa3.67□□□□□ -1.82
SGMS1-205ENST00000498514 VSIG10L2P0DP72 767 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 LAG3P18627 525 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 SDHAP31040 664 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 USP14P54578 494 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 ALDH6A1Q02252 535 aaKnown RBP3.66□□□□□ -1.82
SGMS1-205ENST00000498514 GNL2Q13823 731 aaKnown RBP3.66□□□□□ -1.82
SGMS1-205ENST00000498514 TMEM132BQ14DG7 1078 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 DCAF17Q5H9S7 520 aaPredicted RBP3.66□□□□□ -1.82
SGMS1-205ENST00000498514 Q6YL49 198 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 ANKS3Q6ZW76 656 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 SUPT20HQ8NEM7 779 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 ST8SIA2Q92186 375 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 DLG3Q92796 817 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 ERCC4Q92889 916 aaPredicted RBP3.66□□□□□ -1.82
SGMS1-205ENST00000498514 FOXB1Q99853 325 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 NCDNQ9UBB6 729 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 B3GALT1Q9Y5Z6 326 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 SPATA31A6Q5VVP1 1343 aa3.66□□□□□ -1.82
SGMS1-205ENST00000498514 CENPVL1A0A0U1RR11 272 aa3.65□□□□□ -1.83
SGMS1-205ENST00000498514 TRIM24O15164 1050 aa3.65□□□□□ -1.83
SGMS1-205ENST00000498514 DAPK3O43293 454 aa3.65□□□□□ -1.83
SGMS1-205ENST00000498514 TOX4O94842 621 aa3.65□□□□□ -1.83
SGMS1-205ENST00000498514 SCAF4O95104 1147 aaKnown RBP3.65□□□□□ -1.83
SGMS1-205ENST00000498514 JUNP05412 331 aaKnown RBP3.65□□□□□ -1.83
SGMS1-205ENST00000498514 GYPEP15421 78 aa3.65□□□□□ -1.83
SGMS1-205ENST00000498514 GNAT2P19087 354 aa3.65□□□□□ -1.83
SGMS1-205ENST00000498514 ZFP36P26651 326 aaKnown RBP3.65□□□□□ -1.83
SGMS1-205ENST00000498514 ZEB1P37275 1124 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms