RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 NFYCQ13952 458 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 KLHDC10Q6PID8 442 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 GLB1LQ6UWU2 654 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 USP30Q70CQ3 517 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 FERMT3Q86UX7 667 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 RASSF3Q86WH2 238 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 AFAP1L2Q8N4X5 818 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 PITHD1Q9GZP4 211 aaPredicted RBP6.63□□□□□ -1.35
SSR3-209ENST00000498205 OR10A2Q9H208 303 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 JADE2Q9NQC1 790 aa6.63□□□□□ -1.35
SSR3-209ENST00000498205 PMS2P1A4D2B8 440 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 FOXD2O60548 495 aaPredicted RBP6.62□□□□□ -1.35
SSR3-209ENST00000498205 CELA3BP08861 270 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 GPR15P49685 360 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 RAC3P60763 192 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 STRN3Q13033 797 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 MYBPC3Q14896 1274 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 MAN2A1Q16706 1144 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 TBC1D10BQ4KMP7 808 aaPredicted RBP6.62□□□□□ -1.35
SSR3-209ENST00000498205 CCDC178Q5BJE1 867 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 OR5AN1Q8NGI8 311 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 RTF1Q92541 710 aaKnown RBP6.62□□□□□ -1.35
SSR3-209ENST00000498205 MSRAQ9UJ68 235 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 MCM8Q9UJA3 840 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 DENND2AQ9ULE3 1009 aa6.62□□□□□ -1.35
SSR3-209ENST00000498205 NPEPPSL1A6NEC2 478 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 ARHGAP6O43182 974 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 PRICKLE3O43900 615 aaPredicted RBP6.61□□□□□ -1.35
SSR3-209ENST00000498205 ITGB3P05106 788 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 ZNF888P0CJ79 500 aaPredicted RBP6.61□□□□□ -1.35
SSR3-209ENST00000498205 PLP2Q04941 152 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 NOLC1Q14978 699 aaKnown RBP eCLIP6.61□□□□□ -1.35
SSR3-209ENST00000498205 AGBL4Q5VU57 503 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 BROXQ5VW32 411 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 GPR155Q7Z3F1 870 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 TTC9BQ8N6N2 239 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 FERMT2Q96AC1 680 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 HIST1H2AHQ96KK5 128 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 HIST1H2AJQ99878 128 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 HAPLN2Q9GZV7 340 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 POLR3BQ9NW08 1133 aaPredicted RBP6.61□□□□□ -1.35
SSR3-209ENST00000498205 CDC42EP3Q9UKI2 254 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 NOC2LQ9Y3T9 749 aaKnown RBP6.61□□□□□ -1.35
SSR3-209ENST00000498205 KIF21BO75037 1637 aa6.61□□□□□ -1.35
SSR3-209ENST00000498205 BAZ1BQ9UIG0 1483 aaKnown RBP6.6□□□□□ -1.35
SSR3-209ENST00000498205 SBNO2Q9Y2G9 1366 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 A0A0A6YYJ9 748 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 K7ESM1 405 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 DAPK3O43293 454 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 NRP2O60462 931 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 APOL3O95236 402 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 CNOT4O95628 575 aaKnown RBP6.6□□□□□ -1.35
SSR3-209ENST00000498205 MRE11P49959 708 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 RRADP55042 308 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 NFKB2Q00653 900 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 PCOLCEQ15113 449 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 RNF219Q5W0B1 726 aaPredicted RBP6.6□□□□□ -1.35
SSR3-209ENST00000498205 DYDC2Q96IM9 177 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 SAMD11Q96NU1 681 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 MYL10Q9BUA6 226 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 OSBPL6Q9BZF3 934 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 POFUT1Q9H488 388 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 NR2E1Q9Y466 385 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 NUMBLQ9Y6R0 609 aa6.6□□□□□ -1.35
SSR3-209ENST00000498205 NEMP1O14524 444 aa6.59□□□□□ -1.35
SSR3-209ENST00000498205 OPHN1O60890 802 aa6.59□□□□□ -1.35
SSR3-209ENST00000498205 XPAP23025 273 aaPredicted RBP6.59□□□□□ -1.35
SSR3-209ENST00000498205 FILIP1Q7Z7B0 1213 aa6.59□□□□□ -1.35
SSR3-209ENST00000498205 CIR1Q86X95 450 aaPredicted RBP6.59□□□□□ -1.35
SSR3-209ENST00000498205 BCL6BQ8N143 479 aaPredicted RBP6.59□□□□□ -1.35
SSR3-209ENST00000498205 CDYL2Q8N8U2 506 aa6.59□□□□□ -1.35
SSR3-209ENST00000498205 SLC7A6OSQ96CW6 309 aaPredicted RBP6.59□□□□□ -1.35
SSR3-209ENST00000498205 WDR92Q96MX6 357 aa6.59□□□□□ -1.35
SSR3-209ENST00000498205 ACAP3Q96P50 834 aa6.59□□□□□ -1.35
SSR3-209ENST00000498205 LMF1Q96S06 567 aa6.59□□□□□ -1.35
SSR3-209ENST00000498205 RBM15Q96T37 977 aaKnown RBP eCLIP6.59□□□□□ -1.35
SSR3-209ENST00000498205 MTG2Q9H4K7 406 aa6.59□□□□□ -1.35
SSR3-209ENST00000498205 PUF60Q9UHX1 559 aaKnown RBP6.59□□□□□ -1.35
SSR3-209ENST00000498205 GOLGA3Q08378 1498 aa6.59□□□□□ -1.36
SSR3-209ENST00000498205 MYPNQ86TC9 1320 aa6.58□□□□□ -1.36
SSR3-209ENST00000498205 KDM1AO60341 852 aa6.58□□□□□ -1.36
SSR3-209ENST00000498205 FSBPO95073 299 aa6.58□□□□□ -1.36
SSR3-209ENST00000498205 EYA4O95677 639 aa6.58□□□□□ -1.36
SSR3-209ENST00000498205 LARP4Q71RC2 724 aaKnown RBP eCLIP6.58□□□□□ -1.363e-7■□□□□ 8.4
SSR3-209ENST00000498205 SPATS2Q86XZ4 545 aaKnown RBP6.58□□□□□ -1.36
SSR3-209ENST00000498205 UBR7Q8N806 425 aa6.58□□□□□ -1.36
SSR3-209ENST00000498205 NEIL1Q96FI4 390 aaPredicted RBP6.58□□□□□ -1.36
SSR3-209ENST00000498205 ZNF496Q96IT1 587 aaPredicted RBP6.58□□□□□ -1.36
SSR3-209ENST00000498205 PAWRQ96IZ0 340 aaKnown RBP6.58□□□□□ -1.36
SSR3-209ENST00000498205 NOL10Q9BSC4 688 aaKnown RBP6.58□□□□□ -1.36
SSR3-209ENST00000498205 NELFAQ9H3P2 528 aa6.58□□□□□ -1.36
SSR3-209ENST00000498205 PPP4R1LQ9P1A2 415 aa6.58□□□□□ -1.36
SSR3-209ENST00000498205 FAM184BQ9ULE4 1060 aa6.58□□□□□ -1.36
SSR3-209ENST00000498205 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.58□□□□□ -1.36
SSR3-209ENST00000498205 CTDP1Q9Y5B0 961 aaPredicted RBP6.58□□□□□ -1.36
SSR3-209ENST00000498205 PCDHB6Q9Y5E3 794 aa6.58□□□□□ -1.36
SSR3-209ENST00000498205 ATAD2BQ9ULI0 1458 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms