RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 EMC2Q15006 297 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 RTN4RL1Q86UN2 441 aaPredicted RBP18.64■□□□□ 0.57
ABCF3-218ENST00000498136 CATSPER3Q86XQ3 398 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 TCP11Q8WWU5 503 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 INTS4Q96HW7 963 aaKnown RBP18.64■□□□□ 0.57
ABCF3-218ENST00000498136 MTRQ99707 1265 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 ADAM2Q99965 735 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 GCOM2Q9BZD3 368 aaPredicted RBP18.64■□□□□ 0.57
ABCF3-218ENST00000498136 TSPYL2Q9H2G4 693 aaPredicted RBP18.64■□□□□ 0.57
ABCF3-218ENST00000498136 TMX1Q9H3N1 280 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 DHX33Q9H6R0 707 aaKnown RBP18.64■□□□□ 0.57
ABCF3-218ENST00000498136 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.64■□□□□ 0.57
ABCF3-218ENST00000498136 ANKEF1Q9NU02 776 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 LRFN2Q9ULH4 789 aa18.64■□□□□ 0.57
ABCF3-218ENST00000498136 TTC3P53804 2025 aa18.63■□□□□ 0.57
ABCF3-218ENST00000498136 A0A087WZ62 844 aa18.63■□□□□ 0.57
ABCF3-218ENST00000498136 LINC01553A4QN01 128 aa18.63■□□□□ 0.57
ABCF3-218ENST00000498136 GAS2O43903 313 aaKnown RBP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 CSDE1O75534 798 aaKnown RBP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 SPATA31C1P0DKV0 1188 aa18.63■□□□□ 0.57
ABCF3-218ENST00000498136 DARSP14868 501 aaKnown RBP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 FGFR4P22455 802 aa18.63■□□□□ 0.57
ABCF3-218ENST00000498136 CCT6AP40227 531 aaKnown RBP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 FXR2P51116 673 aaKnown RBP eCLIP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 HTRA4P83105 476 aaPredicted RBP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 DTHD1Q6ZMT9 781 aa18.63■□□□□ 0.57
ABCF3-218ENST00000498136 FERMT3Q86UX7 667 aa18.63■□□□□ 0.57
ABCF3-218ENST00000498136 KSR1Q8IVT5 923 aa18.63■□□□□ 0.57
ABCF3-218ENST00000498136 PSPC1Q8WXF1 523 aaKnown RBP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 TGS1Q96RS0 853 aaKnown RBP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 FDXACB1Q9BRP7 624 aaPredicted RBP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 POLR3CQ9BUI4 534 aaPredicted RBP18.63■□□□□ 0.57
ABCF3-218ENST00000498136 COL4A3BPQ9Y5P4 624 aa18.63■□□□□ 0.57
ABCF3-218ENST00000498136 RFXAPO00287 272 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 MGEA5O60502 916 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 HSP90AA1P07900 732 aaKnown RBP18.62■□□□□ 0.57
ABCF3-218ENST00000498136 STAG3L1P0CL83 205 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 ZSCAN20P17040 1043 aaPredicted RBP18.62■□□□□ 0.57
ABCF3-218ENST00000498136 RPA1P27694 616 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 POTEGQ6S5H5 508 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 BRAPQ7Z569 592 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 SPRED2Q7Z698 418 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 ZNF410Q86VK4 478 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 NPAS4Q8IUM7 802 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 MAFAQ8NHW3 353 aaPredicted RBP18.62■□□□□ 0.57
ABCF3-218ENST00000498136 SNX21Q969T3 373 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 NACC1Q96RE7 527 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 INO80BQ9C086 356 aaPredicted RBP18.62■□□□□ 0.57
ABCF3-218ENST00000498136 ATP6V0A4Q9HBG4 840 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 NLRC5Q86WI3 1866 aa18.62■□□□□ 0.57
ABCF3-218ENST00000498136 USO1O60763 962 aaKnown RBP18.61■□□□□ 0.57
ABCF3-218ENST00000498136 DGAT1O75907 488 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 SRGAP2CP0DJJ0 459 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 PRPHP41219 470 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 SARSP49591 514 aaKnown RBP18.61■□□□□ 0.57
ABCF3-218ENST00000498136 RARRES1P49788 294 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 PDIA5Q14554 519 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 FIBCD1Q8N539 461 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 SNX29Q8TEQ0 813 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 PRPF31Q8WWY3 499 aaKnown RBP18.61■□□□□ 0.57
ABCF3-218ENST00000498136 RGS18Q9NS28 235 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 C1orf112Q9NSG2 853 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 PCDHB7Q9Y5E2 793 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 STK24Q9Y6E0 443 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 CHD9Q3L8U1 2897 aa18.61■□□□□ 0.57
ABCF3-218ENST00000498136 COL4A4P53420 1690 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-218ENST00000498136 ADGRA3Q8IWK6 1321 aa18.6■□□□□ 0.57
ABCF3-218ENST00000498136 XRCC6P12956 609 aaKnown RBP eCLIP18.6■□□□□ 0.57
ABCF3-218ENST00000498136 SYT1P21579 422 aa18.6■□□□□ 0.57
ABCF3-218ENST00000498136 SFPQP23246 707 aaKnown RBP eCLIP18.6■□□□□ 0.57
ABCF3-218ENST00000498136 ATP2C1P98194 919 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-218ENST00000498136 LAMTOR4Q0VGL1 99 aa18.6■□□□□ 0.57
ABCF3-218ENST00000498136 KRT79Q5XKE5 535 aa18.6■□□□□ 0.57
ABCF3-218ENST00000498136 FAM43BQ6ZT52 329 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-218ENST00000498136 SLC24A5Q71RS6 500 aa18.6■□□□□ 0.57
ABCF3-218ENST00000498136 MICALL1Q8N3F8 863 aa18.6■□□□□ 0.57
ABCF3-218ENST00000498136 IGSF22Q8N9C0 903 aa18.6■□□□□ 0.57
ABCF3-218ENST00000498136 SP7Q8TDD2 431 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-218ENST00000498136 PPM1EQ8WY54 764 aa18.6■□□□□ 0.57
ABCF3-218ENST00000498136 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-218ENST00000498136 ARHGEF35A5YM69 484 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 EPOPA6NHQ4 379 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 ASAP2O43150 1006 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 DGKIO75912 1065 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 ERVK-21P61565 698 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 BTG3Q14201 252 aaPredicted RBP18.59■□□□□ 0.57
ABCF3-218ENST00000498136 ADGRE1Q14246 886 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 PAN2Q504Q3 1202 aaKnown RBP18.59■□□□□ 0.57
ABCF3-218ENST00000498136 MAEAQ7L5Y9 396 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 CATSPER4Q7RTX7 472 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 RNF149Q8NC42 400 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 GDPD5Q8WTR4 605 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 C17orf80Q9BSJ5 609 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 XPNPEP1Q9NQW7 623 aa18.59■□□□□ 0.57
ABCF3-218ENST00000498136 DBR1Q9UK59 544 aaKnown RBP18.59■□□□□ 0.57
ABCF3-218ENST00000498136 COL6A3P12111 3177 aa18.58■□□□□ 0.57
ABCF3-218ENST00000498136 VWA3AA6NCI4 1184 aa18.58■□□□□ 0.56
ABCF3-218ENST00000498136 PP2D1A8MPX8 630 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms