RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 IL18RAPO95256 599 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SERPINA1P01009 418 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PSAPP07602 524 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 RAP2AP10114 183 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CSTF2P33240 577 aaKnown RBP eCLIP1.62□□□□□ -2.15
XRN1-214ENST00000498077 CCT4P50991 539 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 RENBPP51606 427 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 IST1P53990 364 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PSMA6P60900 246 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 ERVK-9P63128 1117 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TRIM14Q14142 442 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 DSC3Q14574 896 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TTLL4Q14679 1199 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CARTPTQ16568 116 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 RASGRP2Q7LDG7 609 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 NUP54Q7Z3B4 507 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SP8Q8IXZ3 490 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CCDC13Q8IYE1 715 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ZNF654Q8IZM8 581 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 LMNTD1Q8N9Z9 388 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ZNF398Q8TD17 642 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PARD3BQ8TEW8 1205 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ING5Q8WYH8 240 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 RND1Q92730 232 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 INTS12Q96CB8 462 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 IL17RAQ96F46 866 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 LRRC46Q96FV0 321 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 VCPIP1Q96JH7 1222 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 OR14A2Q96R54 314 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 LGMNQ99538 433 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 EXO5Q9H790 373 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TOMM22Q9NS69 142 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TXLNGQ9NUQ3 528 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 KANSL3Q9P2N6 904 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PAPPA2Q9BXP8 1791 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ARHGAP5Q13017 1502 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ZNF609O15014 1411 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MED19A0JLT2 244 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 ERC2O15083 957 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PALMO75781 387 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 DKK1O94907 266 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CHRM2P08172 466 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CAPN3P20807 821 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CCNCP24863 283 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CD96P40200 585 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ENTPD1P49961 510 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 GDF10P55107 478 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SMAD4Q13485 552 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 RPS6KA2Q15349 733 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CCDC153Q494R4 210 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PLA2G2CQ5R387 149 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TMTC4Q5T4D3 741 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 RASIP1Q5U651 963 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ZNF385CQ66K41 422 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 CYHR1Q6ZMK1 362 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TRIM67Q6ZTA4 783 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 EPM2AIP1Q7L775 607 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 NLRP14Q86W24 1093 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CHERPQ8IWX8 916 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 POC5Q8NA72 575 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 NLGN2Q8NFZ4 835 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SCG3Q8WXD2 468 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 GTPBP3Q969Y2 492 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 ZNF512BQ96KM6 892 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 ZNF354BQ96LW1 612 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 GUCD1Q96NT3 240 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PHOX2BQ99453 314 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SEPT5Q99719 369 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 MGME1Q9BQP7 344 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 FAM49AQ9H0Q0 323 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 MTIF3Q9H2K0 278 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 ST7Q9NRC1 585 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 HACL1Q9UJ83 578 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 KCNS2Q9ULS6 477 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MAGED2Q9UNF1 606 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 LRRFIP2Q9Y608 721 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 KNDC1Q76NI1 1749 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CNTNAP4Q9C0A0 1308 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MUC4Q99102 2169 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MYO18BQ8IUG5 2567 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 NPIPA5A0A0B4J1W7 369 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 C5orf49A4QMS7 147 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ANKDD1BA6NHY2 528 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 NPIPA5E9PKD4 350 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 NPIPA3F8WFD2 350 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ZNF263O14978 683 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 LETM1O95202 739 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 KIF4AO95239 1232 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 RASAL1O95294 804 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 RSPH10BP0C881 870 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 FAM157BP0CG42 384 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 HCLS1P14317 486 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 TKTP29401 623 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 IL15P40933 162 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 PPM1FP49593 454 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 CDH11P55287 796 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PLCB3Q01970 1234 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TMEM62Q0P6H9 643 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 LCP2Q13094 533 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MTMR3Q13615 1198 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms