RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
VEGFA-215ENST00000497139 GGT7Q9UJ14 662 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 PITPNM2Q9BZ72 1349 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 ANKRD36CQ5JPF3 1778 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 M0R2N6 131 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 PODXLO00592 558 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 PDE8BO95263 885 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 RARGP13631 454 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 PHKA1P46020 1223 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 FKBP3Q00688 224 aaKnown RBP14.03□□□□□ -0.16
VEGFA-215ENST00000497139 SFSWAPQ12872 951 aaKnown RBP14.03□□□□□ -0.16
VEGFA-215ENST00000497139 ORC2Q13416 577 aaPredicted RBP14.03□□□□□ -0.16
VEGFA-215ENST00000497139 RNF220Q5VTB9 566 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 SV2BQ7L1I2 683 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 EXOC3L1Q86VI1 746 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 LCORLQ8N3X6 602 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 MAGEB18Q96M61 343 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 CARD9Q9H257 536 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 NENFQ9UMX5 172 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 TRIM33Q9UPN9 1127 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 DCCP43146 1447 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 KIAA0391O15091 583 aaKnown RBP14.02□□□□□ -0.16
VEGFA-215ENST00000497139 RIPK2O43353 540 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 PRKAB2O43741 272 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 FGRP09769 529 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 PRKCIP41743 596 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 YARSP54577 528 aaKnown RBP14.02□□□□□ -0.16
VEGFA-215ENST00000497139 ZC3H6P61129 1189 aaKnown RBP14.02□□□□□ -0.16
VEGFA-215ENST00000497139 KPNB1Q14974 876 aaKnown RBP14.02□□□□□ -0.16
VEGFA-215ENST00000497139 CALML4Q96GE6 196 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 RMDN2Q96LZ7 410 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 TMEM60Q9H2L4 133 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 NAGPAQ9UK23 515 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 AMFRQ9UKV5 643 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 THRAP3Q9Y2W1 955 aaKnown RBP14.02□□□□□ -0.16
VEGFA-215ENST00000497139 UBR2Q8IWV8 1755 aa14.02□□□□□ -0.16
VEGFA-215ENST00000497139 COL18A1P39060 1754 aa14.02□□□□□ -0.17
VEGFA-215ENST00000497139 MAPK7Q13164 816 aa14.02□□□□□ -0.17
VEGFA-215ENST00000497139 TRMT10CQ7L0Y3 403 aaKnown RBP14.02□□□□□ -0.17
VEGFA-215ENST00000497139 VPS36Q86VN1 386 aa14.02□□□□□ -0.17
VEGFA-215ENST00000497139 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.17
VEGFA-215ENST00000497139 GANQ9H2C0 597 aa14.02□□□□□ -0.17
VEGFA-215ENST00000497139 TAOK3Q9H2K8 898 aa14.02□□□□□ -0.17
VEGFA-215ENST00000497139 TLE6Q9H808 572 aa14.02□□□□□ -0.17
VEGFA-215ENST00000497139 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-215ENST00000497139 TMEM120BA0PK00 339 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 SIGLEC16A6NMB1 481 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 DCTN3O75935 186 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 GFPT2O94808 682 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 FGGP02679 453 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 POLGP54098 1239 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-215ENST00000497139 JAMLQ86YT9 394 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 EPS8L3Q8TE67 593 aaKnown RBP14.01□□□□□ -0.17
VEGFA-215ENST00000497139 GBP5Q96PP8 586 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 PLIN2Q99541 437 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 OR52Z1P0C646 297 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 PLTPP55058 493 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 PUM3Q15397 648 aaKnown RBP14.01□□□□□ -0.17
VEGFA-215ENST00000497139 ALKBH5Q6P6C2 394 aaKnown RBP14.01□□□□□ -0.17
VEGFA-215ENST00000497139 ARHGEF18Q6ZSZ5 1173 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 MAEAQ7L5Y9 396 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 ECHDC2Q86YB7 292 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 FBXO25Q8TCJ0 367 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 NR1H4Q96RI1 486 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-215ENST00000497139 CNNM1Q9NRU3 951 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 FAM205AQ6ZU69 1335 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 LRP5O75197 1615 aa14.01□□□□□ -0.17
VEGFA-215ENST00000497139 UPP2O95045 317 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 H2AFZP0C0S5 128 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 SF3A3Q12874 501 aaKnown RBP eCLIP14□□□□□ -0.171e-11■■■■■ 27
VEGFA-215ENST00000497139 TXNRD1Q16881 649 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 ZCWPW2Q504Y3 356 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 H2AFVQ71UI9 128 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 VSIG1Q86XK7 387 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 ZBTB38Q8NAP3 1195 aaPredicted RBP14□□□□□ -0.17
VEGFA-215ENST00000497139 LRRC8CQ8TDW0 803 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 TGS1Q96RS0 853 aaKnown RBP14□□□□□ -0.17
VEGFA-215ENST00000497139 NDNQ99608 321 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 TRIM31Q9BZY9 425 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 NMRK1Q9NWW6 199 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 GRHL1Q9NZI5 618 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 PCDHGA4Q9Y5G9 962 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 TNS3Q68CZ2 1445 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 A0A1B0GVG6 124 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 SMIM23A6NLE4 172 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 EIF4E1BA6NMX2 242 aaKnown RBP14□□□□□ -0.17
VEGFA-215ENST00000497139 TJP3O95049 919 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 CHRNA3P32297 505 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 PTK2Q05397 1052 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 MGAT5Q09328 741 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 STRN3Q13033 797 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 VSTM1Q6UX27 236 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 IRF2BP2Q7Z5L9 587 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 TRIM59Q8IWR1 403 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 ANKLE1Q8NAG6 615 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 PROCA1Q8NCQ7 364 aaPredicted RBP14□□□□□ -0.17
VEGFA-215ENST00000497139 ARHGEF2Q92974 986 aaKnown RBP14□□□□□ -0.17
VEGFA-215ENST00000497139 UBE2OQ9C0C9 1292 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms