RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 LRCH2Q5VUJ6 765 aa4.9□□□□□ -1.63
VPS26A-208ENST00000497022 USP30Q70CQ3 517 aa4.9□□□□□ -1.63
VPS26A-208ENST00000497022 FILIP1Q7Z7B0 1213 aa4.9□□□□□ -1.63
VPS26A-208ENST00000497022 SYNPOQ8N3V7 929 aa4.9□□□□□ -1.63
VPS26A-208ENST00000497022 LARP4BQ92615 738 aaKnown RBP4.9□□□□□ -1.63
VPS26A-208ENST00000497022 RNPC3Q96LT9 517 aaKnown RBP4.9□□□□□ -1.63
VPS26A-208ENST00000497022 MMRN2Q9H8L6 949 aa4.9□□□□□ -1.63
VPS26A-208ENST00000497022 CABP5Q9NP86 173 aa4.9□□□□□ -1.63
VPS26A-208ENST00000497022 ACSS2Q9NR19 701 aa4.9□□□□□ -1.63
VPS26A-208ENST00000497022 NR2E1Q9Y466 385 aa4.9□□□□□ -1.63
VPS26A-208ENST00000497022 DMRT1Q9Y5R6 373 aa4.9□□□□□ -1.63
VPS26A-208ENST00000497022 MATN2O00339 956 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 ARHGAP6O43182 974 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 JMJD7P0C870 316 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 FLT3P36888 993 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 RPS19P39019 145 aaKnown RBP4.89□□□□□ -1.63
VPS26A-208ENST00000497022 FNTBP49356 437 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 MRE11P49959 708 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 MEOX1P50221 254 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 DUSP8Q13202 625 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 CDCA2Q69YH5 1023 aaPredicted RBP4.89□□□□□ -1.63
VPS26A-208ENST00000497022 UBE2R2Q712K3 238 aaPredicted RBP4.89□□□□□ -1.63
VPS26A-208ENST00000497022 FOXB1Q99853 325 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 DPYSL5Q9BPU6 564 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 B4GALT6Q9UBX8 382 aa4.89□□□□□ -1.63
VPS26A-208ENST00000497022 H7C1D1 291 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 CBX4O00257 560 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 CDC14BO60729 498 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 RANGAP1P46060 587 aaPredicted RBP4.88□□□□□ -1.63
VPS26A-208ENST00000497022 STAT5BP51692 787 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 ATXN1P54253 815 aaKnown RBP4.88□□□□□ -1.63
VPS26A-208ENST00000497022 TCEA2Q15560 299 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 CFAP100Q494V2 611 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 RTKN2Q8IZC4 609 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 BCL6BQ8N143 479 aaPredicted RBP4.88□□□□□ -1.63
VPS26A-208ENST00000497022 CFHR4Q92496 578 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 E2F7Q96AV8 911 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 OR14A2Q96R54 314 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 OR10A2Q9H208 303 aa4.88□□□□□ -1.63
VPS26A-208ENST00000497022 C12orf65Q9H3J6 166 aaKnown RBP4.88□□□□□ -1.63
VPS26A-208ENST00000497022 INTS7Q9NVH2 962 aaKnown RBP4.88□□□□□ -1.63
VPS26A-208ENST00000497022 MAGEC2Q9UBF1 373 aaPredicted RBP4.88□□□□□ -1.63
VPS26A-208ENST00000497022 RAMP2O60895 175 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 PRLP01236 227 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 CYP17A1P05093 508 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 FBLP22087 321 aaKnown RBP4.87□□□□□ -1.63
VPS26A-208ENST00000497022 RGS3P49796 1198 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 SLC6A3Q01959 620 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 MAP3K12Q12852 859 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 ZNF174Q15697 407 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 C21orf62-AS1Q17RA5 79 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 NPM2Q86SE8 214 aaKnown RBP4.87□□□□□ -1.63
VPS26A-208ENST00000497022 HOMER1Q86YM7 354 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 ZNF808Q8N4W9 903 aaPredicted RBP4.87□□□□□ -1.63
VPS26A-208ENST00000497022 KIAA1958Q8N8K9 716 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 MAML3Q96JK9 1138 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 C16orf92Q96LL3 132 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 PLA2G12BQ9BX93 195 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 PCIF1Q9H4Z3 704 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 PUF60Q9UHX1 559 aaKnown RBP4.87□□□□□ -1.63
VPS26A-208ENST00000497022 CD2APQ9Y5K6 639 aa4.87□□□□□ -1.63
VPS26A-208ENST00000497022 PEX11BO96011 259 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 LMO1P25800 156 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 PTX3P26022 381 aaPredicted RBP4.86□□□□□ -1.63
VPS26A-208ENST00000497022 ROM1Q03395 351 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 HGFACQ04756 655 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 TTC38Q5R3I4 469 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 C16orf86Q6ZW13 317 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 ZNF627Q7L945 461 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 NME9Q86XW9 330 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 ULK2Q8IYT8 1036 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 OR14K1Q8NGZ2 314 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 APPBP2Q92624 585 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 ORAI3Q9BRQ5 295 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 FAM184BQ9ULE4 1060 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 VWA7Q9Y334 891 aa4.86□□□□□ -1.63
VPS26A-208ENST00000497022 UBA6A0AVT1 1052 aaPredicted RBP4.85□□□□□ -1.63
VPS26A-208ENST00000497022 FAM83GA6ND36 823 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 SLC9A1P19634 815 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 HIBADHP31937 336 aaKnown RBP4.85□□□□□ -1.63
VPS26A-208ENST00000497022 ANTXR2P58335 489 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 ADAM15Q13444 863 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 EPHA7Q15375 998 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 TKFCQ3LXA3 575 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 CREB3L3Q68CJ9 461 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 SLFN12LQ6IEE8 588 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 NAF1Q96HR8 494 aaKnown RBP4.85□□□□□ -1.63
VPS26A-208ENST00000497022 ELF4Q99607 663 aaPredicted RBP4.85□□□□□ -1.63
VPS26A-208ENST00000497022 MTFR1LQ9H019 292 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 TLR9Q9NR96 1032 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 FANCLQ9NW38 375 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 SAE1Q9UBE0 346 aaPredicted RBP4.85□□□□□ -1.63
VPS26A-208ENST00000497022 MAGEL2Q9UJ55 1249 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 CTDP1Q9Y5B0 961 aaPredicted RBP4.85□□□□□ -1.63
VPS26A-208ENST00000497022 SPO11Q9Y5K1 396 aa4.85□□□□□ -1.63
VPS26A-208ENST00000497022 PMS2P1A4D2B8 440 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 SLC26A4O43511 780 aa4.84□□□□□ -1.63
VPS26A-208ENST00000497022 ATP2A2P16615 1042 aaKnown RBP4.84□□□□□ -1.63
VPS26A-208ENST00000497022 POU3F2P20265 443 aaPredicted RBP4.84□□□□□ -1.63
VPS26A-208ENST00000497022 SESN2P58004 480 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms