RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 EXOC7Q9UPT5 735 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 UBIAD1Q9Y5Z9 338 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 EPN1Q9Y6I3 576 aaPredicted RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 ZHX2Q9Y6X8 837 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 SSC5DA1L4H1 1573 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 EVPLQ92817 2033 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 EIF3CLB5ME19 914 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 EML1O00423 815 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 AKR1B10O60218 316 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 SLITRK3O94933 977 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 LYPLA2O95372 231 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 AFPP02771 609 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 NR3C1P04150 777 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 PSAPP07602 524 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 CCDC172P0C7W6 258 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 ARP10275 920 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 KRT13P13646 458 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 TAL1P17542 331 aaPredicted RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 PSMC2P35998 433 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 SMTNP53814 917 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 PSMC5P62195 406 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 SNRPFP62306 86 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 IRX3P78415 501 aaPredicted RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 CKAP4Q07065 602 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 KIF5AQ12840 1032 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 PLS1Q14651 629 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 MEA1Q16626 185 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 MIIPQ5JXC2 388 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 ODR4Q5SWX8 454 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 SFMBT2Q5VUG0 894 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 RAD9BQ6WBX8 426 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 SLC30A10Q6XR72 485 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 CATSPERGQ6ZRH7 1159 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 ZNF662Q6ZS27 426 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 ZC3H3Q8IXZ2 948 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 C4orf19Q8IY42 314 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 DNERQ8NFT8 737 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 TRPM4Q8TD43 1214 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 GTF3C2Q8WUA4 911 aaPredicted RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 SCFD1Q8WVM8 642 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 CLEC4DQ8WXI8 215 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 UBXN4Q92575 508 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 ZKSCAN4Q969J2 545 aaPredicted RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 VTI1AQ96AJ9 217 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 SPAG5Q96R06 1193 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 UIMC1Q96RL1 719 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 P2RX7Q99572 595 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 EIF3CQ99613 913 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 NAPGQ99747 312 aaPredicted RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 HSD17B14Q9BPX1 270 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 PDCD2LQ9BRP1 358 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 DESI2Q9BSY9 194 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 LSM14BQ9BX40 385 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 GBP3Q9H0R5 595 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 KCTD10Q9H3F6 313 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 L2HGDHQ9H9P8 463 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 AGO4Q9HCK5 861 aaKnown RBP7.59□□□□□ -1.19
USP39-219ENST00000496047 KCNH7Q9NS40 1196 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 ANKEF1Q9NU02 776 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 RGL1Q9NZL6 768 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 PCDHA2Q9Y5H9 948 aa7.59□□□□□ -1.19
USP39-219ENST00000496047 NFASCO94856 1347 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 ZC3H4Q9UPT8 1303 aaKnown RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 NPHP3-ACAD11A0A0J9YXS1 232 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 SSU72P8A0A1W2PR75 194 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 GTPBP10A4D1E9 387 aaKnown RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 EFCAB8A8MWE9 144 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 TACC1O75410 805 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 PRPF6O94906 941 aaKnown RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 EGFRP00533 1210 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 SERPING1P05155 500 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 MYBP10242 640 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 SCP2P22307 547 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 RFX1P22670 979 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 ANXA13P27216 316 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 PSMC6P62333 389 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 ERVK-24P63145 666 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 DMP1Q13316 513 aaPredicted RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 MYBPC2Q14324 1141 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 PPP2R5AQ15172 486 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 ASIC2Q16515 512 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 IFI16Q16666 785 aaKnown RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 ARSHQ5FYA8 562 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 MUM1L1Q5H9M0 696 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 DCAF17Q5H9S7 520 aaPredicted RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 ZNF569Q5MCW4 686 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 CCDC122Q5T0U0 273 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 CCDC70Q6NSX1 233 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 MIS18BP1Q6P0N0 1132 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 GBP6Q6ZN66 633 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 GADL1Q6ZQY3 521 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 C1orf186Q6ZWK4 172 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 USP50Q70EL3 339 aaPredicted RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 EPM2AIP1Q7L775 607 aaPredicted RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 ARMC9Q7Z3E5 817 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 TRIM59Q8IWR1 403 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 FAM186BQ8IYM0 893 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 ANKRD13AQ8IZ07 590 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 PROCA1Q8NCQ7 364 aaPredicted RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 BANK1Q8NDB2 785 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms