RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	MAP9	Q49MG5	647 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	LRRC24	Q50LG9	513 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	HEATR6	Q6AI08	1181 aa	Known RBP	5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	APOBEC3H	Q6NTF7	200 aa	Known RBP	5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	TREML4	Q6UXN2	200 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	NSMF	Q6X4W1	530 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	LDHAL6A	Q6ZMR3	332 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	MIGA2	Q7L4E1	593 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	WFDC8	Q8IUA0	241 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	HID1	Q8IV36	788 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	NPAS3	Q8IXF0	933 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	RNF214	Q8ND24	703 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	ATL2	Q8NHH9	583 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	KLHDC4	Q8TBB5	520 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	UBASH3B	Q8TF42	649 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	CYB5D2	Q8WUJ1	264 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	LEO1	Q8WVC0	666 aa	Predicted RBP	5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	BAD	Q92934	168 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	RELT	Q969Z4	430 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	VWCE	Q96DN2	955 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	CCDC74B	Q96LY2	380 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	FANCD2OS	Q96PS1	177 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	CNNM1	Q9NRU3	951 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	SFMBT1	Q9UHJ3	866 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	TCEAL9	Q9UHQ7	104 aa		5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	TNPO3	Q9Y5L0	923 aa	Known RBP	5.22	□□□□□ -1.57
VPS52-222	ENST00000495981	LTBP2	Q14767	1821 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	BLACE	A4D250	179 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981		M0R082	166 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	GPR39	O43194	453 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	LILRB5	O75023	590 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	CLEC3A	O75596	197 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	KRT37	O76014	449 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	WFS1	O76024	890 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	CST3	P01034	146 aa	Predicted RBP	5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	HMGCR	P04035	888 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	SLFN14	P0C7P3	912 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	NAT2	P11245	290 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	RAB27A	P51159	221 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	RHBDL3	P58872	404 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	CYP4F3	Q08477	520 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	STRN3	Q13033	797 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	STAT4	Q14765	748 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	DHCR24	Q15392	516 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	PUM3	Q15397	648 aa	Known RBP	5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	ANKRD39	Q53RE8	183 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	RNFT1	Q5M7Z0	435 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	NOL9	Q5SY16	702 aa	Known RBP	5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	FKBP1C	Q5VVH2	108 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	PRAMEF13	Q5VWM6	474 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	FAM83A	Q86UY5	434 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	PPM1K	Q8N3J5	372 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	BVES	Q8NE79	360 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	ZNF417	Q8TAU3	575 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	ZNF507	Q8TCN5	953 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	TEKT1	Q969V4	418 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	FBXL18	Q96ME1	805 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	ZNF587	Q96SQ5	575 aa	Predicted RBP	5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	LBHD1	Q9BQE6	289 aa	Predicted RBP	5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	TMPRSS13	Q9BYE2	586 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	EMC9	Q9Y3B6	208 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	DNAH14	Q0VDD8	3507 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	CACNA1H	O95180	2353 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	GAK	O14976	1311 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	MAST3	O60307	1309 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	PTPRC	P08575	1304 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	SALL1	Q9NSC2	1324 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	MYO9B	Q13459	2157 aa		5.21	□□□□□ -1.58
VPS52-222	ENST00000495981	ZNF236	Q9UL36	1845 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	TRIO	O75962	3097 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	RIF1	Q5UIP0	2472 aa	Known RBP	5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	NAV1	Q8NEY1	1877 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	BAHCC1	Q9P281	2608 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	MYO5A	Q9Y4I1	1855 aa	Known RBP	5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	SMIM22	K7EJ46	135 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	AKAP10	O43572	662 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	PLIN1	O60240	522 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	WDHD1	O75717	1129 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	PDE8B	O95263	885 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	RASGRP1	O95267	797 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	WISP1	O95388	367 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	NID1	P14543	1247 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	CAPN2	P17655	700 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	ALAS2	P22557	587 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	PRDX5	P30044	214 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	RBM5	P52756	815 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	PPAT	Q06203	517 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	CACNB2	Q08289	660 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	NFIA	Q12857	509 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	CHAF1A	Q13111	956 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	PPP2R5A	Q15172	486 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	CCL14	Q16627	93 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	METTL24	Q5JXM2	366 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	AKNAD1	Q5T1N1	836 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	SLC4A10	Q6U841	1118 aa		5.2	□□□□□ -1.58
VPS52-222	ENST00000495981	ATG9A	Q7Z3C6	839 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms