RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 GLE1Q53GS7 698 aaKnown RBP9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 ODR4Q5SWX8 454 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 GLT8D2Q9H1C3 349 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 RPAP3Q9H6T3 665 aaPredicted RBP9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 KCNH7Q9NS40 1196 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 CEP72Q9P209 647 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 PCDHA2Q9Y5H9 948 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 CYP3A7-CYP3A51PA0A087WV96 503 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 A0A087X0T9 212 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 FAM228BP0C875 321 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 TRIM49P0CI25 452 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 TRIM49CP0CI26 452 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 CYP3A7P24462 503 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 GTF2A1P52655 376 aaPredicted RBP9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 NPEPPSP55786 919 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 PAK2Q13177 524 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 BTNL9Q6UXG8 535 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 ARHGAP27Q6ZUM4 889 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 KLHL7Q8IXQ5 586 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 IQCKQ8N0W5 287 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 SYT2Q8N9I0 419 aaPredicted RBP9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 LXNQ9BS40 222 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 LRRC27Q9C0I9 530 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 GDF3Q9NR23 364 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 TSKSQ9UJT2 592 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 MYH4Q9Y623 1939 aa9.92□□□□□ -0.82
TM9SF4-207ENST00000495749 TNFRSF8P28908 595 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 GUCY1A3Q02108 690 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 NAB2Q15742 525 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 Q4G0T1 1027 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 PLA2G4FQ68DD2 849 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 SYCP3Q8IZU3 236 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 FAM20AQ96MK3 541 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 KIFC3Q9BVG8 833 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 EDEM3Q9BZQ6 932 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 KCTD10Q9H3F6 313 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 LUC7LQ9NQ29 371 aaKnown RBP9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 ARMCX3Q9UH62 379 aaPredicted RBP9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 TCEAL9Q9UHQ7 104 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 CEP350Q5VT06 3117 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 PHF20L1A8MW92 1017 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 VCAM1P19320 739 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 SKOR1P84550 965 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 KLHL30Q0D2K2 578 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 PSMD2Q13200 908 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 ORC2Q13416 577 aaPredicted RBP9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 KNOP1Q1ED39 458 aaKnown RBP9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 PRPF38AQ8NAV1 312 aaKnown RBP9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 ZSWIM2Q8NEG5 633 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 AGBL3Q8NEM8 1001 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 TRPM4Q8TD43 1214 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 CASKIN2Q8WXE0 1202 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 KAT2BQ92831 832 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 RNPC3Q96LT9 517 aaKnown RBP9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 CENPHQ9H3R5 247 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 RNF14Q9UBS8 474 aa9.91□□□□□ -0.82
TM9SF4-207ENST00000495749 GOLGA8IPA6NC78 632 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 GOLGA8JA6NMD2 632 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 CPP00450 1065 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 BAATQ14032 418 aaPredicted RBP9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 SLC18A3Q16572 532 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 ZCWPW2Q504Y3 356 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 FBXW10Q5XX13 1052 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 MIER3Q7Z3K6 550 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 MAATS1Q7Z4T9 603 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 TEPSINQ96N21 525 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 SPAG5Q96R06 1193 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 HSD17B14Q9BPX1 270 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 RANBP17Q9H2T7 1088 aaKnown RBP9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 ZNF536O15090 1300 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 ARHGEF35A5YM69 484 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 RAD51CO43502 376 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 PSMD10O75832 226 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 NR3C1P04150 777 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 HLTFQ14527 1009 aaKnown RBP eCLIP9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 MEI1Q5TIA1 1274 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 EEPD1Q7L9B9 569 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 FAM178BQ8IXR5 827 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 PIK3R5Q8WYR1 880 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 RMDN3Q96TC7 470 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 NUCKS1Q9H1E3 243 aaKnown RBP9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 SEPT11Q9NVA2 429 aaKnown RBP9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 LRRC37AA6NMS7 1700 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 NRXN2Q9P2S2 1712 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 ZNF541Q9H0D2 1346 aa9.9□□□□□ -0.82
TM9SF4-207ENST00000495749 KCNK3O14649 394 aa9.9□□□□□ -0.83
TM9SF4-207ENST00000495749 CLSTN1O94985 981 aa9.9□□□□□ -0.83
TM9SF4-207ENST00000495749 LSP1P33241 339 aa9.9□□□□□ -0.83
TM9SF4-207ENST00000495749 MRPS9P82933 396 aaKnown RBP9.9□□□□□ -0.83
TM9SF4-207ENST00000495749 TEX2Q8IWB9 1127 aa9.9□□□□□ -0.83
TM9SF4-207ENST00000495749 INPP4AQ96PE3 977 aaPredicted RBP9.9□□□□□ -0.83
TM9SF4-207ENST00000495749 CHORDC1Q9UHD1 332 aaPredicted RBP9.9□□□□□ -0.83
TM9SF4-207ENST00000495749 FEM1BQ9UK73 627 aa9.9□□□□□ -0.83
TM9SF4-207ENST00000495749 PCDHGC5Q9Y5F6 944 aa9.9□□□□□ -0.83
TM9SF4-207ENST00000495749 GRID2IPA4D2P6 1211 aa9.89□□□□□ -0.83
TM9SF4-207ENST00000495749 XRCC5P13010 732 aaKnown RBP9.89□□□□□ -0.83
TM9SF4-207ENST00000495749 NR1D1P20393 614 aa9.89□□□□□ -0.83
TM9SF4-207ENST00000495749 HPDP32754 393 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms