RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 CNSTQ6PJW8 725 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 PPP1R42Q7Z4L9 355 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 MRPL10Q7Z7H8 261 aaKnown RBP10.11□□□□□ -0.79
RPSA-209ENST00000495394 SLC9B2Q86UD5 537 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 KLHDC4Q8TBB5 520 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 KAT2BQ92831 832 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 ARL5BQ96KC2 179 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 TNIP3Q96KP6 325 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 FERD3LQ96RJ6 166 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 DRC3Q9H069 523 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 ACAD9Q9H845 621 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 SCPEP1Q9HB40 452 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 GALNT8Q9NY28 637 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 ARHGAP28Q9P2N2 729 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 TMEM5Q9Y2B1 443 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 GIT1Q9Y2X7 761 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 SH3GLB1Q9Y371 365 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 SBF2Q86WG5 1849 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 DDX5P17844 614 aaKnown RBP10.11□□□□□ -0.79
RPSA-209ENST00000495394 GARTP22102 1010 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 ARHGDIBP52566 201 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 MVPQ14764 893 aaKnown RBP10.11□□□□□ -0.79
RPSA-209ENST00000495394 R3HDM1Q15032 1099 aaKnown RBP10.11□□□□□ -0.79
RPSA-209ENST00000495394 MAPRE2Q15555 327 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 GPATCH4Q5T3I0 446 aaKnown RBP10.11□□□□□ -0.79
RPSA-209ENST00000495394 CCDC183Q5T5S1 534 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 GKAP1Q5VSY0 366 aaPredicted RBP10.11□□□□□ -0.79
RPSA-209ENST00000495394 C8orf74Q6P047 294 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 TUBA3EQ6PEY2 450 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 PI16Q6UXB8 463 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 BRAPQ7Z569 592 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 SPATA5Q8NB90 893 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 SUPT20HQ8NEM7 779 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 PRPF18Q99633 342 aaKnown RBP10.11□□□□□ -0.79
RPSA-209ENST00000495394 LPIN3Q9BQK8 851 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 SPZ1Q9BXG8 430 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 USP26Q9BXU7 913 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 FAM129AQ9BZQ8 928 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 TRIM5Q9C035 493 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 GBP3Q9H0R5 595 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 EHD1Q9H4M9 534 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 POLR3EQ9NVU0 708 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 PDP2Q9P2J9 529 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 ATXN10Q9UBB4 475 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 MTRRQ9UBK8 725 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 CIDEBQ9UHD4 219 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 ZMIZ1Q9ULJ6 1067 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 INPP5FQ9Y2H2 1132 aa10.11□□□□□ -0.79
RPSA-209ENST00000495394 OR6C65A6NJZ3 312 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 SPDYE16A6NNV3 312 aaPredicted RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 STMND1H3BQB6 276 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 PSMD14O00487 310 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 VWA5AO00534 786 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 E2F3O00716 465 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 ENC1O14682 589 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 MAP3K7O43318 606 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 DGKIO75912 1065 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 KRT1P04264 644 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 IL10P22301 178 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 HADHAP40939 763 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 SGCGQ13326 291 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 SNCBQ16143 134 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 GEN1Q17RS7 908 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 KIAA0907Q7Z7F0 614 aaPredicted RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 TBC1D1Q86TI0 1168 aaPredicted RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 GALNT13Q8IUC8 556 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 FAM26EQ8N5C1 309 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 SRPK1Q96SB4 655 aaKnown RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 RIOK1Q9BRS2 568 aaKnown RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 AGXT2Q9BYV1 514 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 CRISPLD2Q9H0B8 497 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 HMGXB4Q9UGU5 601 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 EIF2B4Q9UI10 523 aaKnown RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 CORO1CQ9ULV4 474 aaPredicted RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 NOB1Q9ULX3 412 aaKnown RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 PCDH11XQ9BZA7 1347 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 PCDH11YQ9BZA8 1340 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 LIN7AO14910 233 aaPredicted RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 WDR46O15213 610 aaKnown RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 CBFA2T3O75081 653 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 HOXB1P14653 301 aaPredicted RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 TYRP1P17643 537 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 SOX6P35712 828 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 BCAMP50895 628 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 PLCD1P51178 756 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 CHMP4BP1P59074 171 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 MAP3K9P80192 1104 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 GSTM4Q03013 218 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 PLEKHO1Q53GL0 409 aaPredicted RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 EAPPQ56P03 285 aaPredicted RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 KRBOX4Q5JUW0 171 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 LIN54Q6MZP7 749 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 MIS18BP1Q6P0N0 1132 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 MFSD6Q6ZSS7 791 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 IL17REQ8NFR9 667 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 UTP15Q8TED0 518 aaKnown RBP10.1□□□□□ -0.79
RPSA-209ENST00000495394 PEX13Q92968 403 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 ZNF653Q96CK0 615 aa10.1□□□□□ -0.79
RPSA-209ENST00000495394 MFSD14AQ96MC6 490 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms