RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 CHST12Q9NRB3 414 aa12.32□□□□□ -0.44
SCRN1-209ENST00000494620 VAV3Q9UKW4 847 aa12.32□□□□□ -0.44
SCRN1-209ENST00000494620 IGKV6-21A0A0C4DH24 114 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 NCK2O43639 380 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 LPXNO60711 386 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 SKIP12755 728 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 DARSP14868 501 aaKnown RBP12.31□□□□□ -0.44
SCRN1-209ENST00000494620 MCM7P33993 719 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 TRAPPC10P48553 1259 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 ANO5Q75V66 913 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 FAM228AQ86W67 206 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 LINC01465Q8N7H1 131 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 TNFRSF25Q93038 417 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 ZNF689Q96CS4 500 aaPredicted RBP12.31□□□□□ -0.44
SCRN1-209ENST00000494620 DYDC2Q96IM9 177 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 LXNQ9BS40 222 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 ADAMTS10Q9H324 1103 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 TMX1Q9H3N1 280 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 TMEM161AQ9NX61 479 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 PCDHB12Q9Y5F1 795 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 STK24Q9Y6E0 443 aa12.31□□□□□ -0.44
SCRN1-209ENST00000494620 FAM205CA6NFA0 338 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 TBKBP1A7MCY6 615 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 C5orf67F2Z3F1 127 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 SLITRK3O94933 977 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 EOMESO95936 686 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 XRCC6P12956 609 aaKnown RBP eCLIP12.3□□□□□ -0.44
SCRN1-209ENST00000494620 FAM189BP81408 668 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 CYP4A11Q02928 519 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 CTTNQ14247 550 aaKnown RBP12.3□□□□□ -0.44
SCRN1-209ENST00000494620 CSPP1Q1MSJ5 1256 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 PAN2Q504Q3 1202 aaKnown RBP12.3□□□□□ -0.44
SCRN1-209ENST00000494620 TMEM40Q8WWA1 233 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 PSPC1Q8WXF1 523 aaKnown RBP12.3□□□□□ -0.44
SCRN1-209ENST00000494620 CLP1Q92989 425 aaKnown RBP12.3□□□□□ -0.44
SCRN1-209ENST00000494620 ZNF668Q96K58 619 aaPredicted RBP12.3□□□□□ -0.44
SCRN1-209ENST00000494620 KIF2CQ99661 725 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 EIF2AK1Q9BQI3 630 aaKnown RBP12.3□□□□□ -0.44
SCRN1-209ENST00000494620 SH2D3AQ9BRG2 576 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 RAB34Q9BZG1 259 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 PRDM6Q9NQX0 595 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 ANKEF1Q9NU02 776 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 RGL1Q9NZL6 768 aa12.3□□□□□ -0.44
SCRN1-209ENST00000494620 A0A087WZ62 844 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 C9IYK1 514 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 H3BQV1 296 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 STBD1O95210 358 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 NPEPPSP55786 919 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 TFDP1Q14186 410 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 MXD4Q14582 209 aaPredicted RBP12.29□□□□□ -0.44
SCRN1-209ENST00000494620 ZNF174Q15697 407 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 PLA2G4FQ68DD2 849 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 CATSPER4Q7RTX7 472 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 SPRED2Q7Z698 418 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 SRGAP1Q7Z6B7 1085 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 NOSTRINQ8IVI9 506 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 LINC01599Q8WXQ3 324 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 RSPH1Q8WYR4 309 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 P2RX5Q93086 422 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 NLRP4Q96MN2 994 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 MTRQ99707 1265 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 FDXACB1Q9BRP7 624 aaPredicted RBP12.29□□□□□ -0.44
SCRN1-209ENST00000494620 TMEM117Q9H0C3 514 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 NSUN3Q9H649 340 aaKnown RBP12.29□□□□□ -0.44
SCRN1-209ENST00000494620 PUF60Q9UHX1 559 aaKnown RBP12.29□□□□□ -0.44
SCRN1-209ENST00000494620 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
SCRN1-209ENST00000494620 COL4A3BPQ9Y5P4 624 aa12.29□□□□□ -0.44
SCRN1-209ENST00000494620 CARNS1A5YM72 827 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 TMEM150BA6NC51 233 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 DGAT1O75907 488 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 LYPLA2O95372 231 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 OR52Z1P0C646 297 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 SRGAP2CP0DJJ0 459 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 TECP42680 631 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 ST3GAL1Q11201 340 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 DSC3Q14574 896 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 BMS1Q14692 1282 aaKnown RBP12.28□□□□□ -0.44
SCRN1-209ENST00000494620 PCBP1Q15365 356 aaKnown RBP eCLIP12.28□□□□□ -0.44
SCRN1-209ENST00000494620 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 MCTP1Q6DN14 999 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 TWF2Q6IBS0 349 aaKnown RBP12.28□□□□□ -0.44
SCRN1-209ENST00000494620 EP400NLQ6ZTU2 488 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 RNF169Q8NCN4 708 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 MICAL1Q8TDZ2 1067 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 PRPF31Q8WWY3 499 aaKnown RBP12.28□□□□□ -0.44
SCRN1-209ENST00000494620 PGBD4Q96DM1 585 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 MTMR9Q96QG7 549 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 NACC1Q96RE7 527 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 HSD17B14Q9BPX1 270 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 DHX33Q9H6R0 707 aaKnown RBP12.28□□□□□ -0.44
SCRN1-209ENST00000494620 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
SCRN1-209ENST00000494620 MRPL42Q9Y6G3 142 aaKnown RBP12.28□□□□□ -0.44
SCRN1-209ENST00000494620 MYH9P35579 1960 aaKnown RBP12.28□□□□□ -0.44
SCRN1-209ENST00000494620 A0A0U1RQF3 1178 aa12.27□□□□□ -0.45
SCRN1-209ENST00000494620 MGEA5O60502 916 aa12.27□□□□□ -0.45
SCRN1-209ENST00000494620 LAG3P18627 525 aa12.27□□□□□ -0.45
SCRN1-209ENST00000494620 RAB27AP51159 221 aa12.27□□□□□ -0.45
SCRN1-209ENST00000494620 KRT17Q04695 432 aa12.27□□□□□ -0.45
SCRN1-209ENST00000494620 SPIRE1Q08AE8 756 aa12.27□□□□□ -0.45
SCRN1-209ENST00000494620 EMC2Q15006 297 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms