RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 AOAHP28039 575 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 RBM25P49756 843 aaKnown RBP3.26□□□□□ -1.89
PTPN12-212ENST00000494248 NTRK3Q16288 839 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 PRR16Q569H4 304 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 FAM111BQ6SJ93 734 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 ZC3H7AQ8IWR0 971 aaKnown RBP3.26□□□□□ -1.89
PTPN12-212ENST00000494248 IFNL3Q8IZI9 196 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 NLGN4XQ8N0W4 816 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 SGSM3Q96HU1 749 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 RPL10LQ96L21 214 aaKnown RBP3.26□□□□□ -1.89
PTPN12-212ENST00000494248 BTBD2Q9BX70 525 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 RIC8BQ9NVN3 520 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 SYBUQ9NX95 663 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 SALL3Q9BXA9 1300 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 IKBKBO14920 756 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 MAFO75444 373 aaPredicted RBP3.25□□□□□ -1.89
PTPN12-212ENST00000494248 GJB6O95452 261 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 SSBP05455 408 aaKnown RBP eCLIP3.25□□□□□ -1.89
PTPN12-212ENST00000494248 KRT10P13645 584 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 ECE1P42892 770 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 MFAP1P55081 439 aaKnown RBP3.25□□□□□ -1.89
PTPN12-212ENST00000494248 HERVK_113P62684 666 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 SMAD3P84022 425 aaKnown RBP3.25□□□□□ -1.89
PTPN12-212ENST00000494248 PLEKHG4Q58EX7 1191 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 FIGNQ5HY92 759 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 HDGFL2Q7Z4V5 671 aaPredicted RBP3.25□□□□□ -1.89
PTPN12-212ENST00000494248 C1QL2Q7Z5L3 287 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 SRRM1Q8IYB3 904 aaKnown RBP3.25□□□□□ -1.89
PTPN12-212ENST00000494248 IPPKQ9H8X2 491 aa3.25□□□□□ -1.89
PTPN12-212ENST00000494248 R3HCC1Q9Y3T6 440 aaKnown RBP3.25□□□□□ -1.89
PTPN12-212ENST00000494248 EPN1Q9Y6I3 576 aaPredicted RBP3.25□□□□□ -1.89
PTPN12-212ENST00000494248 UBE2QL1A1L167 161 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 C2orf78A6NCI8 922 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 MAN2B1O00754 1011 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 C4BPAP04003 597 aaKnown RBP3.24□□□□□ -1.89
PTPN12-212ENST00000494248 PLA2G5P39877 138 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 FAM189BP81408 668 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 FOXI1Q12951 378 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 HSP90AA2PQ14568 343 aaPredicted RBP3.24□□□□□ -1.89
PTPN12-212ENST00000494248 MB21D1Q8N884 522 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 BOLLQ8N9W6 283 aaKnown RBP3.24□□□□□ -1.89
PTPN12-212ENST00000494248 SIMC1Q8NDZ2 872 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 ATXN2LQ8WWM7 1075 aaKnown RBP3.24□□□□□ -1.89
PTPN12-212ENST00000494248 OSBP2Q969R2 916 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 ZNF778Q96MU6 729 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 AARSD1Q9BTE6 412 aaKnown RBP3.24□□□□□ -1.89
PTPN12-212ENST00000494248 WDR11Q9BZH6 1224 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 OR10A5Q9H207 317 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 ACBD3Q9H3P7 528 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 SERHL2Q9H4I8 314 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 CCSER2Q9H7U1 834 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 CYP4F11Q9HBI6 524 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 CAPN10Q9HC96 672 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 UCKL1Q9NWZ5 548 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 ANKFY1Q9P2R3 1169 aa3.24□□□□□ -1.89
PTPN12-212ENST00000494248 AHRRA9YTQ3 701 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 RBMXL2O75526 392 aaKnown RBP3.23□□□□□ -1.89
PTPN12-212ENST00000494248 AMY2AP04746 511 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 AMY2BP19961 511 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 TAP1Q03518 808 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 GNL2Q13823 731 aaKnown RBP3.23□□□□□ -1.89
PTPN12-212ENST00000494248 SEC23AQ15436 765 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 GPR19Q15760 415 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 GRAMD4Q6IC98 578 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 EP400NLQ6ZTU2 488 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 DPH6Q7L8W6 267 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 UBE2Q2Q8WVN8 375 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 SMG7Q92540 1137 aaKnown RBP3.23□□□□□ -1.89
PTPN12-212ENST00000494248 ALG1Q9BT22 464 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 ARHGEF4Q9NR80 690 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 SORCS3Q9UPU3 1222 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 INSL6Q9Y581 213 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 MRVI1Q9Y6F6 885 aa3.23□□□□□ -1.89
PTPN12-212ENST00000494248 IQCA1LA6NCM1 817 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 GOLGA6L6A8MZA4 724 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 MATN4O95460 622 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 PABPC1P11940 636 aaKnown RBP3.22□□□□□ -1.89
PTPN12-212ENST00000494248 TIGD2Q4W5G0 525 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 NAIF1Q69YI7 327 aaPredicted RBP3.22□□□□□ -1.89
PTPN12-212ENST00000494248 CCDC62Q6P9F0 684 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 ARHGAP36Q6ZRI8 547 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 ANKRD53Q8N9V6 530 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 WDR48Q8TAF3 677 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 CPT1CQ8TCG5 803 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 LPPQ93052 612 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 ZNF428Q96B54 188 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 C16orf92Q96LL3 132 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 SLC6A15Q9H2J7 730 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 VWA7Q9Y334 891 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 ATP23Q9Y6H3 246 aa3.22□□□□□ -1.89
PTPN12-212ENST00000494248 ASXL2Q76L83 1435 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 BLACEA4D250 179 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 PRODHO43272 600 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 CLASP2O75122 1294 aaKnown RBP3.21□□□□□ -1.9
PTPN12-212ENST00000494248 ETFBP38117 255 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 ABCG1P45844 678 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 SEC24CP53992 1094 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 FKBP15Q5T1M5 1219 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 NSMFQ6X4W1 530 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 MDGA1Q8NFP4 955 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms