RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TISP43B9A030 160 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 DKC1O60832 514 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 PSAPP07602 524 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 ACTN1P12814 892 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 PSMC2P35998 433 aaKnown RBP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 EIF4A3P38919 411 aaKnown RBP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 CYP2J2P51589 502 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 POLR2FP61218 127 aaKnown RBP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 KRT83P78385 493 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 FSTL1Q12841 308 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 RAPGEF1Q13905 1077 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 MYBPC2Q14324 1141 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 ASTE1Q2TB18 679 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 ABHD15Q6UXT9 468 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 KIAA1328Q86T90 577 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 ANKRD35Q8N283 1001 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 FAM133AQ8N9E0 248 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 BSNDQ8WZ55 320 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 OPTNQ96CV9 577 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 ACCSQ96QU6 501 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 PAGR1Q9BTK6 254 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 CARD6Q9BX69 1037 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 NUCKS1Q9H1E3 243 aaKnown RBP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 XPNPEP1Q9NQW7 623 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 GCNT4Q9P109 453 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 V9GYY5 206 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 ADGRA3Q8IWK6 1321 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 SYNGAP1Q96PV0 1343 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 RBAK-RBAKDNI3L0D1 243 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 SORBS3O60504 671 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 IPO7O95373 1038 aaKnown RBP11.66□□□□□ -0.54
CLCN6-208ENST00000494028 TRIM49P0CI25 452 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 TRIM49CP0CI26 452 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 SLC9A1P19634 815 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 PON1P27169 355 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 COPB2P35606 906 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 GTF2BQ00403 316 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 AMPD2Q01433 879 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 SP4Q02446 784 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 BFSP1Q12934 665 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 TTLL12Q14166 644 aaPredicted RBP11.66□□□□□ -0.54
CLCN6-208ENST00000494028 PPP2R5AQ15172 486 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 STXBP2Q15833 593 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 ASIC2Q16515 512 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 TDRD12Q587J7 1177 aaKnown RBP11.66□□□□□ -0.54
CLCN6-208ENST00000494028 SFMBT2Q5VUG0 894 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 TCERG1LQ5VWI1 586 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 GPAT2Q6NUI2 795 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 NCAPG2Q86XI2 1143 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 MAP4K3Q8IVH8 894 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 TMEM174Q8WUU8 243 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 LACRTQ9GZZ8 138 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 R3HDMLQ9H3Y0 253 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 TMEM206Q9H813 350 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 TXNRD2Q9NNW7 524 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 SEPT9Q9UHD8 586 aaPredicted RBP11.66□□□□□ -0.54
CLCN6-208ENST00000494028 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
CLCN6-208ENST00000494028 CTAGE9A4FU28 777 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 GLTPD2A6NH11 291 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 SLC16A4O15374 487 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 EIF3JO75822 258 aaKnown RBP11.65□□□□□ -0.54
CLCN6-208ENST00000494028 SERPING1P05155 500 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 FMO5P49326 533 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 PEX3P56589 373 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 JAM2P57087 298 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 MYL7Q01449 175 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 SP2Q02086 613 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 CYP27A1Q02318 531 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 EXOC3L4Q17RC7 722 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 EAPPQ56P03 285 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-208ENST00000494028 CCDC122Q5T0U0 273 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 LDLRAD1Q5T700 205 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 FAM102BQ5T8I3 360 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 KLHDC7AQ5VTJ3 777 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 MIS18BP1Q6P0N0 1132 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 GBP6Q6ZN66 633 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 ARMC9Q7Z3E5 817 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 HAUS6Q7Z4H7 955 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 SYCP3Q8IZU3 236 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 EHBP1Q8NDI1 1231 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 SLC17A8Q8NDX2 589 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 TMEM161BQ8NDZ6 487 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 MNS1Q8NEH6 495 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 CEP170P1Q96L14 293 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 CCDC42Q96M95 316 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 CBWD1Q9BRT8 395 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 KIFC3Q9BVG8 833 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 TSGA10Q9BZW7 698 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 ATP6V0A4Q9HBG4 840 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 CGNQ9P2M7 1197 aaKnown RBP11.65□□□□□ -0.54
CLCN6-208ENST00000494028 FBXL5Q9UKA1 691 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 MYO6Q9UM54 1294 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 GUCA1BQ9UMX6 200 aa11.65□□□□□ -0.54
CLCN6-208ENST00000494028 IGKV6D-21A0A0A0MT36 114 aa11.64□□□□□ -0.55
CLCN6-208ENST00000494028 IQCA1LA6NCM1 817 aa11.64□□□□□ -0.55
CLCN6-208ENST00000494028 PJA2O43164 708 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms