RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ZBTB42B2RXF5 422 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 ZBTB39O15060 712 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 HIP1RO75146 1068 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 PARNO95453 639 aaKnown RBP16.51■□□□□ 0.23
ACTB-213ENST00000493945 EN2P19622 333 aaPredicted RBP16.51■□□□□ 0.23
ACTB-213ENST00000493945 ATN1P54259 1190 aaPredicted RBP16.51■□□□□ 0.23
ACTB-213ENST00000493945 ALCAMQ13740 583 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 NFKBIBQ15653 356 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 CCDC183Q5T5S1 534 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 GDF6Q6KF10 455 aaPredicted RBP16.51■□□□□ 0.23
ACTB-213ENST00000493945 SERINC5Q86VE9 423 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 ZNF410Q86VK4 478 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 ZBTB8OSQ8IWT0 167 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 DIS3LQ8TF46 1054 aaKnown RBP16.51■□□□□ 0.23
ACTB-213ENST00000493945 TRAPPC12Q8WVT3 735 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 SH2D3AQ9BRG2 576 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 REEP2Q9BRK0 252 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 RUSC1Q9BVN2 902 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 INO80BQ9C086 356 aaPredicted RBP16.51■□□□□ 0.23
ACTB-213ENST00000493945 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
ACTB-213ENST00000493945 CLSTN2Q9H4D0 955 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 SUCLA2Q9P2R7 463 aaPredicted RBP16.51■□□□□ 0.23
ACTB-213ENST00000493945 ATP11BQ9Y2G3 1177 aa16.51■□□□□ 0.23
ACTB-213ENST00000493945 TREHO43280 583 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 LETM1O95202 739 aaPredicted RBP16.5■□□□□ 0.23
ACTB-213ENST00000493945 NAMPTP43490 491 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 PHKA2P46019 1235 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 CDK7P50613 346 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 ADAM17P78536 824 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 FAM43BQ6ZT52 329 aaPredicted RBP16.5■□□□□ 0.23
ACTB-213ENST00000493945 UNC13DQ70J99 1090 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 DYMQ7RTS9 669 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 RPAINQ86UA6 219 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 FAM126BQ8IXS8 530 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 DEPTORQ8TB45 409 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 GSDMAQ96QA5 445 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 FAM49AQ9H0Q0 323 aaPredicted RBP16.5■□□□□ 0.23
ACTB-213ENST00000493945 PANK4Q9NVE7 773 aa16.5■□□□□ 0.23
ACTB-213ENST00000493945 GRIN2DO15399 1336 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.49■□□□□ 0.23
ACTB-213ENST00000493945 MYMKA6NI61 221 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 B4GALT4O60513 344 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 CLTBP09497 229 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 PLS3P13797 630 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 PPP1R2P41236 205 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
ACTB-213ENST00000493945 CLCN3P51790 818 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 SOX10P56693 466 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 PSMD2Q13200 908 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 PCBP1Q15365 356 aaKnown RBP eCLIP16.49■□□□□ 0.236e-31■■■■■ 38.5
ACTB-213ENST00000493945 TRIM60Q495X7 471 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 MAEAQ7L5Y9 396 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 RHPN2Q8IUC4 686 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 FAM178BQ8IXR5 827 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 LRRC71Q8N4P6 559 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 NLRP7Q8WX94 980 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 ANP32EQ9BTT0 268 aa16.49■□□□□ 0.23
ACTB-213ENST00000493945 TRMT13Q9NUP7 481 aaKnown RBP16.49■□□□□ 0.23
ACTB-213ENST00000493945 A0A087WWV3 80 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 LRRIQ4A6NIV6 560 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 MAPTP10636 758 aaKnown RBP16.48■□□□□ 0.23
ACTB-213ENST00000493945 THPOP40225 353 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 EFNA5P52803 228 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 POU5F1BQ06416 359 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 NCBP1Q09161 790 aaKnown RBP16.48■□□□□ 0.23
ACTB-213ENST00000493945 RAD51AP2Q09MP3 1159 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 STIM1Q13586 685 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 GIT2Q14161 759 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 KCNB1Q14721 858 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 HERC4Q5GLZ8 1057 aaPredicted RBP16.48■□□□□ 0.23
ACTB-213ENST00000493945 MARCH8Q5T0T0 291 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 TRIML1Q8N9V2 468 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 TMEM143Q96AN5 459 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 CEP89Q96ST8 783 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 GCOM2Q9BZD3 368 aaPredicted RBP16.48■□□□□ 0.23
ACTB-213ENST00000493945 XPNPEP1Q9NQW7 623 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 PDLIM7Q9NR12 457 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 OLFML3Q9NRN5 406 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 TRPV2Q9Y5S1 764 aa16.48■□□□□ 0.23
ACTB-213ENST00000493945 CCDC169A6NNP5 214 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 K7ENM7 598 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 RPN1P04843 607 aaKnown RBP16.47■□□□□ 0.23
ACTB-213ENST00000493945 SFPQP23246 707 aaKnown RBP eCLIP16.47■□□□□ 0.23
ACTB-213ENST00000493945 ARL2P36404 184 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 ZNF131P52739 623 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 MRPS6P82932 125 aaKnown RBP16.47■□□□□ 0.23
ACTB-213ENST00000493945 TLE2Q04725 743 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 RBL2Q08999 1139 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 LINC01465Q8N7H1 131 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 USP38Q8NB14 1042 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 DNAJB3Q8WWF6 145 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 SPIRE2Q8WWL2 714 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
ACTB-213ENST00000493945 STAMQ92783 540 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 HVCN1Q96D96 273 aa16.47■□□□□ 0.23
ACTB-213ENST00000493945 NLRP4Q96MN2 994 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms