RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CATSPEREQ5SY80 951 aa6.5□□□□□ -1.37
SMC4-223ENST00000493695 DPY19L2P1Q6NXN4 242 aa6.5□□□□□ -1.37
SMC4-223ENST00000493695 FAM111BQ6SJ93 734 aa6.5□□□□□ -1.37
SMC4-223ENST00000493695 MB21D1Q8N884 522 aa6.5□□□□□ -1.37
SMC4-223ENST00000493695 IGSF22Q8N9C0 903 aa6.5□□□□□ -1.37
SMC4-223ENST00000493695 TCF25Q9BQ70 676 aa6.5□□□□□ -1.37
SMC4-223ENST00000493695 ATP2B1P20020 1258 aa6.49□□□□□ -1.37
SMC4-223ENST00000493695 SDHAP31040 664 aa6.49□□□□□ -1.37
SMC4-223ENST00000493695 PTGS2P35354 604 aa6.49□□□□□ -1.37
SMC4-223ENST00000493695 ADCY7P51828 1080 aa6.49□□□□□ -1.37
SMC4-223ENST00000493695 ALDH6A1Q02252 535 aaKnown RBP6.49□□□□□ -1.37
SMC4-223ENST00000493695 OVCH1Q7RTY7 1134 aa6.49□□□□□ -1.37
SMC4-223ENST00000493695 PEX11BO96011 259 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 GTF2F1P35269 517 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMC4-223ENST00000493695 RGS3P49796 1198 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 ROM1Q03395 351 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 FKBP15Q5T1M5 1219 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 ELOA2Q8IYF1 753 aaPredicted RBP6.48□□□□□ -1.37
SMC4-223ENST00000493695 SYNE4Q8N205 404 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 SLC7A14Q8TBB6 771 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 ATXN2LQ8WWM7 1075 aaKnown RBP6.48□□□□□ -1.37
SMC4-223ENST00000493695 DLG3Q92796 817 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 E2F7Q96AV8 911 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 GPHA2Q96T91 129 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 TANGO6Q9C0B7 1094 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 SIRPGQ9P1W8 387 aa6.48□□□□□ -1.37
SMC4-223ENST00000493695 CCDC9Q9Y3X0 531 aaKnown RBP6.48□□□□□ -1.37
SMC4-223ENST00000493695 C2orf78A6NCI8 922 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 KIF11P52732 1056 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 ZC3H6P61129 1189 aaKnown RBP6.47□□□□□ -1.37
SMC4-223ENST00000493695 SMAD3P84022 425 aaKnown RBP6.47□□□□□ -1.37
SMC4-223ENST00000493695 SLC25A3Q00325 362 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 DGKDQ16760 1214 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 TMEM177Q53S58 311 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 PRAMEF9Q5VWM5 478 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 ULK2Q8IYT8 1036 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 BCL6BQ8N143 479 aaPredicted RBP6.47□□□□□ -1.37
SMC4-223ENST00000493695 OR5AN1Q8NGI8 311 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 SLC25A43Q8WUT9 341 aaPredicted RBP6.47□□□□□ -1.37
SMC4-223ENST00000493695 HAS1Q92839 578 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 FOXB1Q99853 325 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 PCIF1Q9H4Z3 704 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 IL23AQ9NPF7 189 aa6.47□□□□□ -1.37
SMC4-223ENST00000493695 FOXN1O15353 648 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 DAPK3O43293 454 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 MFAP3LO75121 409 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 ANTXR2P58335 489 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 LONRF2Q1L5Z9 754 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 SLFN12LQ6IEE8 588 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 BRAPQ7Z569 592 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 RPUSD2Q8IZ73 545 aaKnown RBP6.46□□□□□ -1.38
SMC4-223ENST00000493695 DYDC2Q96IM9 177 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 BOCQ9BWV1 1114 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 EPC1Q9H2F5 836 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 GPRC5BQ9NZH0 403 aa6.46□□□□□ -1.38
SMC4-223ENST00000493695 UBA6A0AVT1 1052 aaPredicted RBP6.45□□□□□ -1.38
SMC4-223ENST00000493695 TOX4O94842 621 aa6.45□□□□□ -1.38
SMC4-223ENST00000493695 NAALADL2Q58DX5 795 aa6.45□□□□□ -1.38
SMC4-223ENST00000493695 ZC3H12BQ5HYM0 836 aaKnown RBP6.45□□□□□ -1.38
SMC4-223ENST00000493695 RTN4RL1Q86UN2 441 aaPredicted RBP6.45□□□□□ -1.38
SMC4-223ENST00000493695 SCLYQ96I15 445 aa6.45□□□□□ -1.38
SMC4-223ENST00000493695 WDR92Q96MX6 357 aa6.45□□□□□ -1.38
SMC4-223ENST00000493695 FAM193BQ96PV7 902 aaPredicted RBP6.45□□□□□ -1.38
SMC4-223ENST00000493695 TUBGCP5Q96RT8 1024 aa6.45□□□□□ -1.38
SMC4-223ENST00000493695 DNAI1Q9UI46 699 aa6.45□□□□□ -1.38
SMC4-223ENST00000493695 XDHP47989 1333 aa6.45□□□□□ -1.38
SMC4-223ENST00000493695 TCRBV16S1A1N1A0A5B0 115 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 GOLGA6L6A8MZA4 724 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 APOL3O95236 402 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 NUDT3O95989 172 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 KRT4P19013 534 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 TOB2Q14106 344 aaPredicted RBP6.44□□□□□ -1.38
SMC4-223ENST00000493695 NBPF6Q5VWK0 638 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 CC2D1AQ6P1N0 951 aaPredicted RBP6.44□□□□□ -1.38
SMC4-223ENST00000493695 ZNF276Q8N554 614 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 PLA2G15Q8NCC3 412 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 GSTCDQ8NEC7 633 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 FOXRED1Q96CU9 486 aaPredicted RBP6.44□□□□□ -1.38
SMC4-223ENST00000493695 NBPF4Q96M43 638 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 DEPDC7Q96QD5 511 aa6.44□□□□□ -1.38
SMC4-223ENST00000493695 TRAF5O00463 557 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 IPO13O94829 963 aaKnown RBP6.43□□□□□ -1.38
SMC4-223ENST00000493695 PRLP01236 227 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 NPEPPSP55786 919 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 RABL3Q5HYI8 236 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 TTC38Q5R3I4 469 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 ABHD17CQ6PCB6 329 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 FGD2Q7Z6J4 655 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 DDX53Q86TM3 631 aaKnown RBP6.43□□□□□ -1.38
SMC4-223ENST00000493695 SRPK1Q96SB4 655 aaKnown RBP6.43□□□□□ -1.38
SMC4-223ENST00000493695 MNTQ99583 582 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 DNAJC7Q99615 494 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 POLR3BQ9NW08 1133 aaPredicted RBP6.43□□□□□ -1.38
SMC4-223ENST00000493695 SYNPO2Q9UMS6 1093 aa6.43□□□□□ -1.38
SMC4-223ENST00000493695 FAM221BA6H8Z2 402 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 M0R2C6 588 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 NPTXRO95502 500 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 GCP02774 474 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 GNAT2P19087 354 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 PTPAQ15257 358 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms