RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FSTL4Q6MZW2 842 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 D2HGDHQ8N465 521 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 AMER2Q8N7J2 671 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 C2orf69Q8N8R5 385 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 SHCBP1Q8NEM2 672 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 CACTINQ8WUQ7 758 aaKnown RBP4.86□□□□□ -1.63
PTCD3-218ENST00000493430 ARMC5Q96C12 935 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 SCLYQ96I15 445 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 DNAJC7Q99615 494 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 SFMBT1Q9UHJ3 866 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 VWA7Q9Y334 891 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 WDR33Q9C0J8 1336 aaKnown RBP4.86□□□□□ -1.63
PTCD3-218ENST00000493430 IQGAP2Q13576 1575 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 DIP2BQ9P265 1576 aa4.86□□□□□ -1.63
PTCD3-218ENST00000493430 TCRBV16S1A1N1A0A5B0 115 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 CYP27B1O15528 508 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 KCNQ2O43526 872 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 MAFO75444 373 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-218ENST00000493430 PURAQ00577 322 aaKnown RBP4.85□□□□□ -1.63
PTCD3-218ENST00000493430 DPTQ07507 201 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 RBL2Q08999 1139 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 CATSPEREQ5SY80 951 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 ERCC4Q92889 916 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-218ENST00000493430 LPPQ93052 612 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 TMEM176AQ96HP8 235 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 MPHOSPH9Q99550 1183 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 TRIM8Q9BZR9 551 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 ZNF703Q9H7S9 590 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-218ENST00000493430 AGO3Q9H9G7 860 aaKnown RBP4.85□□□□□ -1.63
PTCD3-218ENST00000493430 SNTG2Q9NY99 539 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 GIT1Q9Y2X7 761 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 TTBK1Q5TCY1 1321 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-218ENST00000493430 ABCC2Q92887 1545 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 KIAA0556O60303 1618 aa4.85□□□□□ -1.63
PTCD3-218ENST00000493430 FHAD1B1AJZ9 1412 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 CAPN14A8MX76 684 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 KCNA6P17658 529 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 SESN2P58004 480 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-218ENST00000493430 IRF9Q00978 393 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 ADAM15Q13444 863 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 TUBA3CQ13748 450 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 TMEM177Q53S58 311 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 TUBA3EQ6PEY2 450 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 KLHDC10Q6PID8 442 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 IGSF22Q8N9C0 903 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 ZSWIM2Q8NEG5 633 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 RABGGTAQ92696 567 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 E2F7Q96AV8 911 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 CHFRQ96EP1 664 aa4.84□□□□□ -1.63
PTCD3-218ENST00000493430 SRPK1Q96SB4 655 aaKnown RBP4.84□□□□□ -1.63
PTCD3-218ENST00000493430 MRPL4Q9BYD3 311 aaKnown RBP4.84□□□□□ -1.63
PTCD3-218ENST00000493430 CTDP1Q9Y5B0 961 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-218ENST00000493430 PRG4Q92954 1404 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 A0A1W2PRX2 142 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 H2AFYO75367 372 aaKnown RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 ZBTB48P10074 688 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 ATP2C1P98194 919 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 ALDH6A1Q02252 535 aaKnown RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 RIN1Q13671 783 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 ARHGAP44Q17R89 818 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 SOGA3Q5TF21 947 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 CC2D1AQ6P1N0 951 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 ABHD17CQ6PCB6 329 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 BRAPQ7Z569 592 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 BCL6BQ8N143 479 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 JMYQ8N9B5 988 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 THAP3Q8WTV1 239 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 NEU4Q8WWR8 484 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 GFM2Q969S9 779 aaKnown RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 MKL1Q969V6 931 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 FOXRED1Q96CU9 486 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 C8orf37Q96NL8 207 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 CEP89Q96ST8 783 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 FOXB1Q99853 325 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 BOCQ9BWV1 1114 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 PARPBPQ9NWS1 579 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 C11orf21Q9P2W6 132 aa4.83□□□□□ -1.64
PTCD3-218ENST00000493430 SAE1Q9UBE0 346 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-218ENST00000493430 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 ADH4P08319 380 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 MAKP20794 623 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 ADCY7P51828 1080 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 INHBCP55103 352 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 SPTY2D1Q68D10 685 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-218ENST00000493430 OTOP1Q7RTM1 612 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 FGD2Q7Z6J4 655 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 RTN4RL1Q86UN2 441 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-218ENST00000493430 TMPRSS6Q8IU80 811 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 ANKRD35Q8N283 1001 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 ZNF483Q8TF39 744 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-218ENST00000493430 GCDHQ92947 438 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-218ENST00000493430 SLC7A6OSQ96CW6 309 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-218ENST00000493430 SLC6A15Q9H2J7 730 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 IKZF4Q9H2S9 585 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 MMRN2Q9H8L6 949 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 CEP72Q9P209 647 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 DENND2AQ9ULE3 1009 aa4.82□□□□□ -1.64
PTCD3-218ENST00000493430 FNTBP49356 437 aa4.81□□□□□ -1.64
PTCD3-218ENST00000493430 ROM1Q03395 351 aa4.81□□□□□ -1.64
PTCD3-218ENST00000493430 CRHR2Q13324 411 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms