RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 CSPG5O95196 566 aa23.09■■□□□ 1.29
CLTA-208ENST00000493185 LARGE1O95461 756 aa23.09■■□□□ 1.29
CLTA-208ENST00000493185 DARSP14868 501 aaKnown RBP23.09■■□□□ 1.29
CLTA-208ENST00000493185 FAM189BP81408 668 aa23.09■■□□□ 1.29
CLTA-208ENST00000493185 PUS10Q3MIT2 529 aaKnown RBP23.09■■□□□ 1.29
CLTA-208ENST00000493185 KLHL23Q8NBE8 558 aa23.09■■□□□ 1.29
CLTA-208ENST00000493185 AAASQ9NRG9 546 aa23.09■■□□□ 1.29
CLTA-208ENST00000493185 CLDND1Q9NY35 253 aa23.09■■□□□ 1.29
CLTA-208ENST00000493185 VAV3Q9UKW4 847 aa23.09■■□□□ 1.29
CLTA-208ENST00000493185 EML1O00423 815 aa23.08■■□□□ 1.29
CLTA-208ENST00000493185 STBD1O95210 358 aa23.08■■□□□ 1.29
CLTA-208ENST00000493185 ITGB1P05556 798 aa23.08■■□□□ 1.29
CLTA-208ENST00000493185 FDPSP14324 419 aaKnown RBP23.08■■□□□ 1.29
CLTA-208ENST00000493185 QARSP47897 775 aaKnown RBP23.08■■□□□ 1.29
CLTA-208ENST00000493185 COL19A1Q14993 1142 aa23.08■■□□□ 1.29
CLTA-208ENST00000493185 FAM102BQ5T8I3 360 aa23.08■■□□□ 1.29
CLTA-208ENST00000493185 PTCRAQ6ISU1 281 aaPredicted RBP23.08■■□□□ 1.29
CLTA-208ENST00000493185 NSUN7Q8NE18 718 aaKnown RBP23.08■■□□□ 1.29
CLTA-208ENST00000493185 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.08■■□□□ 1.29
CLTA-208ENST00000493185 NEK9Q8TD19 979 aa23.08■■□□□ 1.29
CLTA-208ENST00000493185 PPP2R3CQ969Q6 453 aa23.08■■□□□ 1.29
CLTA-208ENST00000493185 JPH2Q9BR39 696 aaPredicted RBP23.08■■□□□ 1.29
CLTA-208ENST00000493185 GCOM2Q9BZD3 368 aaPredicted RBP23.08■■□□□ 1.29
CLTA-208ENST00000493185 PCDHB12Q9Y5F1 795 aa23.08■■□□□ 1.29
CLTA-208ENST00000493185 H3BQ06 376 aaPredicted RBP23.07■■□□□ 1.28
CLTA-208ENST00000493185 HOXA2O43364 376 aa23.07■■□□□ 1.28
CLTA-208ENST00000493185 BAG4O95429 457 aaKnown RBP23.07■■□□□ 1.28
CLTA-208ENST00000493185 NR5A1Q13285 461 aa23.07■■□□□ 1.28
CLTA-208ENST00000493185 DRP2Q13474 957 aa23.07■■□□□ 1.28
CLTA-208ENST00000493185 SPPL3Q8TCT6 385 aa23.07■■□□□ 1.28
CLTA-208ENST00000493185 CEP89Q96ST8 783 aa23.07■■□□□ 1.28
CLTA-208ENST00000493185 SH2D3AQ9BRG2 576 aa23.07■■□□□ 1.28
CLTA-208ENST00000493185 IGKV6-21A0A0C4DH24 114 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 P4HBP07237 508 aaKnown RBP23.06■■□□□ 1.28
CLTA-208ENST00000493185 FGFR1P11362 822 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 HYAL1Q12794 435 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 TRIM29Q14134 588 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 EARS2Q5JPH6 523 aaKnown RBP23.06■■□□□ 1.28
CLTA-208ENST00000493185 ANO5Q75V66 913 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 POTEDQ86YR6 584 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 SLFN12Q8IYM2 578 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 POF1BQ8WVV4 589 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 HAS1Q92839 578 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 SUCLA2Q9P2R7 463 aaPredicted RBP23.06■■□□□ 1.28
CLTA-208ENST00000493185 FAM50BQ9Y247 325 aa23.06■■□□□ 1.28
CLTA-208ENST00000493185 PLXNA4Q9HCM2 1894 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 MAFO75444 373 aaPredicted RBP23.05■■□□□ 1.28
CLTA-208ENST00000493185 SEC24BO95487 1268 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 CAMK1Q14012 370 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 CSPP1Q1MSJ5 1256 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 PLA2G4FQ68DD2 849 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 ZNF410Q86VK4 478 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 ABI1Q8IZP0 508 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 TMEM117Q9H0C3 514 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 CYP26B1Q9NR63 512 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 DACT1Q9NYF0 836 aa23.05■■□□□ 1.28
CLTA-208ENST00000493185 FAM205CA6NFA0 338 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 GRXCR2A6NFK2 248 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 JAK2O60674 1132 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 FGFR4P22455 802 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 SFPQP23246 707 aaKnown RBP eCLIP23.04■■□□□ 1.28
CLTA-208ENST00000493185 DNAJB1P25685 340 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 EPHA7Q15375 998 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 NCAPH2Q6IBW4 605 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 ECHDC2Q86YB7 292 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 RHPN2Q8IUC4 686 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 EXOC8Q8IYI6 725 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 SLC7A3Q8WY07 619 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 TNFRSF25Q93038 417 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 INO80BQ9C086 356 aaPredicted RBP23.04■■□□□ 1.28
CLTA-208ENST00000493185 IGFLR1Q9H665 355 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 TYW1Q9NV66 732 aaKnown RBP23.04■■□□□ 1.28
CLTA-208ENST00000493185 PPME1Q9Y570 386 aa23.04■■□□□ 1.28
CLTA-208ENST00000493185 A0A087WZ62 844 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 IL9P15248 144 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 LAG3P18627 525 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 FOSBP53539 338 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 UBE3AQ05086 875 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 CTC1Q2NKJ3 1217 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 THNSL1Q8IYQ7 743 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 COLGALT1Q8NBJ5 622 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 RNF169Q8NCN4 708 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 CEP170P1Q96L14 293 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 FDXACB1Q9BRP7 624 aaPredicted RBP23.03■■□□□ 1.28
CLTA-208ENST00000493185 LXNQ9BS40 222 aa23.03■■□□□ 1.28
CLTA-208ENST00000493185 A0A0U1RQF3 1178 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 CSDE1O75534 798 aaKnown RBP23.02■■□□□ 1.28
CLTA-208ENST00000493185 POLGP54098 1239 aaPredicted RBP23.02■■□□□ 1.28
CLTA-208ENST00000493185 NPEPPSP55786 919 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 OTUD6AQ7L8S5 288 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 FAM178BQ8IXR5 827 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 C4orf19Q8IY42 314 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 DIS3L2Q8IYB7 885 aaKnown RBP23.02■■□□□ 1.28
CLTA-208ENST00000493185 LRRC43Q8N309 656 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 NLRP4Q96MN2 994 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 CASD1Q96PB1 797 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 CHST12Q9NRB3 414 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 HCSTQ9UBK5 93 aa23.02■■□□□ 1.28
CLTA-208ENST00000493185 BTBD18B2RXH4 712 aa23.01■■□□□ 1.27
CLTA-208ENST00000493185 FGF18O76093 207 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms