RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SEPT14Q6ZU15 432 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 CYFIP1Q7L576 1253 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 CACNA2D4Q7Z3S7 1137 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 KSR1Q8IVT5 923 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 CCDC60Q8IWA6 550 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-216ENST00000492977 FAM186BQ8IYM0 893 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 CCDC155Q8N6L0 562 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 SHCBP1Q8NEM2 672 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 BAP1Q92560 729 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 SYN2Q92777 582 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-216ENST00000492977 KIFAP3Q92845 792 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 CEP170P1Q96L14 293 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 NHEJ1Q9H9Q4 299 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-216ENST00000492977 SLC45A1Q9Y2W3 748 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 DOCK5Q9H7D0 1870 aa15.4■□□□□ 0.06
PTPN7-216ENST00000492977 IGSF9BQ9UPX0 1349 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 MYH9P35579 1960 aaKnown RBP15.39■□□□□ 0.05
PTPN7-216ENST00000492977 DNAJC25-GNG10A0A024R161 153 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 LOC102724159A0A0B4J2E5 919 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 GTPBP10A4D1E9 387 aaKnown RBP15.39■□□□□ 0.05
PTPN7-216ENST00000492977 CTIFO43310 598 aaKnown RBP15.39■□□□□ 0.05
PTPN7-216ENST00000492977 DGAT1O75907 488 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 NOL4O94818 638 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 PSEN1P49768 467 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 GNG11P61952 73 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 KCTD2Q14681 263 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 PWP2Q15269 919 aaKnown RBP15.39■□□□□ 0.05
PTPN7-216ENST00000492977 FAM102BQ5T8I3 360 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 MAP1SQ66K74 1059 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-216ENST00000492977 PDXDC1Q6P996 788 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 KCNV1Q6PIU1 500 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 ZNF662Q6ZS27 426 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 RRAGAQ7L523 313 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 HAUS6Q7Z4H7 955 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 C12orf56Q8IXR9 622 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 ACRBPQ8NEB7 543 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 MCPH1Q8NEM0 835 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 SLC35C1Q96A29 364 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 HVCN1Q96D96 273 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 MMP19Q99542 508 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 NTPCRQ9BSD7 190 aaKnown RBP15.39■□□□□ 0.05
PTPN7-216ENST00000492977 LSM14BQ9BX40 385 aaKnown RBP15.39■□□□□ 0.05
PTPN7-216ENST00000492977 L2HGDHQ9H9P8 463 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 PLCB1Q9NQ66 1216 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 PDLIM7Q9NR12 457 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 WDR70Q9NW82 654 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 KCNG1Q9UIX4 513 aa15.39■□□□□ 0.05
PTPN7-216ENST00000492977 MAFBQ9Y5Q3 323 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-216ENST00000492977 EIF3CLB5ME19 914 aaKnown RBP15.38■□□□□ 0.05
PTPN7-216ENST00000492977 KIF5CO60282 957 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 CETPP11597 493 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 CASQ1P31415 396 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 PEX3P56589 373 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 RTP1P59025 263 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 ERVK-9P63128 1117 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 PRKCEQ02156 737 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 SP4Q02446 784 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 ARHGAP29Q52LW3 1261 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 SPIRE2Q8WWL2 714 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 EIF3CQ99613 913 aaKnown RBP15.38■□□□□ 0.05
PTPN7-216ENST00000492977 SH2D3AQ9BRG2 576 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 LZTFL1Q9NQ48 299 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 ZNF302Q9NR11 478 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 CYP26B1Q9NR63 512 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 MYO1AQ9UBC5 1043 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 EXOC7Q9UPT5 735 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 SYNGAP1Q96PV0 1343 aa15.38■□□□□ 0.05
PTPN7-216ENST00000492977 IGKV6D-21A0A0A0MT36 114 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 LRRC53A6NM62 1247 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 IPO7O95373 1038 aaKnown RBP15.37■□□□□ 0.05
PTPN7-216ENST00000492977 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 PRKAR2AP13861 404 aaKnown RBP15.37■□□□□ 0.05
PTPN7-216ENST00000492977 UBA1P22314 1058 aaKnown RBP15.37■□□□□ 0.05
PTPN7-216ENST00000492977 GTF2A2P52657 109 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 DMP1Q13316 513 aaPredicted RBP15.37■□□□□ 0.05
PTPN7-216ENST00000492977 PPP2R5AQ15172 486 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 DCAF17Q5H9S7 520 aaPredicted RBP15.37■□□□□ 0.05
PTPN7-216ENST00000492977 TCERG1LQ5VWI1 586 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 TRMT1LQ7Z2T5 733 aaKnown RBP15.37■□□□□ 0.05
PTPN7-216ENST00000492977 KCNV2Q8TDN2 545 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 CCDC42Q96M95 316 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 CRACR2AQ9BSW2 395 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 MFRPQ9BY79 579 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 IKZF4Q9H2S9 585 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 ZNF408Q9H9D4 720 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 GPRC5CQ9NQ84 441 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 ARID2Q68CP9 1835 aa15.37■□□□□ 0.05
PTPN7-216ENST00000492977 SLC16A4O15374 487 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 FARP2O94887 1054 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-216ENST00000492977 ABCD1P33897 745 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 NPTX2P47972 431 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 CYP2J2P51589 502 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 EXOC3L4Q17RC7 722 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 GBP6Q6ZN66 633 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 MORC4Q8TE76 937 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 WDR24Q96S15 920 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 GANQ9H2C0 597 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 HAUS4Q9H6D7 363 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 ATP6V0A4Q9HBG4 840 aa15.36■□□□□ 0.05
PTPN7-216ENST00000492977 SEPT9Q9UHD8 586 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms