RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 C5orf42Q9H799 3197 aa20.78■□□□□ 0.92
CHD1L-209ENST00000492728 CSDE1O75534 798 aaKnown RBP20.77■□□□□ 0.92
CHD1L-209ENST00000492728 CDKL5O76039 1030 aa20.77■□□□□ 0.92
CHD1L-209ENST00000492728 DARSP14868 501 aaKnown RBP20.77■□□□□ 0.92
CHD1L-209ENST00000492728 EIF4BP23588 611 aaKnown RBP20.77■□□□□ 0.92
CHD1L-209ENST00000492728 ANAPC15P60006 121 aa20.77■□□□□ 0.92
CHD1L-209ENST00000492728 TBC1D8BQ0IIM8 1120 aa20.77■□□□□ 0.92
CHD1L-209ENST00000492728 CLUL1Q15846 466 aa20.77■□□□□ 0.92
CHD1L-209ENST00000492728 NECAB1Q8N987 351 aa20.77■□□□□ 0.92
CHD1L-209ENST00000492728 POF1BQ8WVV4 589 aa20.77■□□□□ 0.92
CHD1L-209ENST00000492728 NIFKQ9BYG3 293 aaKnown RBP20.77■□□□□ 0.92
CHD1L-209ENST00000492728 CWH43Q9H720 699 aa20.77■□□□□ 0.92
CHD1L-209ENST00000492728 TMEM161AQ9NX61 479 aa20.77■□□□□ 0.92
CHD1L-209ENST00000492728 WRAP73Q9P2S5 460 aaPredicted RBP20.77■□□□□ 0.92
CHD1L-209ENST00000492728 IGKV6-21A0A0C4DH24 114 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 TMOD1P28289 359 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 ST3GAL1Q11201 340 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 ME3Q16798 604 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 NAALADL2Q58DX5 795 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 XKR3Q5GH77 459 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 ODR4Q5SWX8 454 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 PLA2G4FQ68DD2 849 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 PIK3AP1Q6ZUJ8 805 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 ANO5Q75V66 913 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 NEK8Q86SG6 692 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 HAS1Q92839 578 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 IGFLR1Q9H665 355 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 C11orf16Q9NQ32 467 aa20.76■□□□□ 0.91
CHD1L-209ENST00000492728 TYW1Q9NV66 732 aaKnown RBP20.76■□□□□ 0.91
CHD1L-209ENST00000492728 CCDC194A0A1B0GVG4 234 aa20.75■□□□□ 0.91
CHD1L-209ENST00000492728 NR5A1Q13285 461 aa20.75■□□□□ 0.91
CHD1L-209ENST00000492728 LRRC55Q6ZSA7 311 aa20.75■□□□□ 0.91
CHD1L-209ENST00000492728 TNFRSF25Q93038 417 aa20.75■□□□□ 0.91
CHD1L-209ENST00000492728 CASD1Q96PB1 797 aa20.75■□□□□ 0.91
CHD1L-209ENST00000492728 ELAC1Q9H777 363 aaKnown RBP20.75■□□□□ 0.91
CHD1L-209ENST00000492728 ATP6V0A4Q9HBG4 840 aa20.75■□□□□ 0.91
CHD1L-209ENST00000492728 ORC3Q9UBD5 711 aaPredicted RBP20.75■□□□□ 0.91
CHD1L-209ENST00000492728 SEC24BO95487 1268 aa20.74■□□□□ 0.91
CHD1L-209ENST00000492728 ATF7P17544 494 aaPredicted RBP20.74■□□□□ 0.91
CHD1L-209ENST00000492728 PPP2R5CQ13362 524 aa20.74■□□□□ 0.91
CHD1L-209ENST00000492728 PPP4R3AQ6IN85 833 aa20.74■□□□□ 0.91
CHD1L-209ENST00000492728 ECHDC2Q86YB7 292 aa20.74■□□□□ 0.91
CHD1L-209ENST00000492728 GJD3Q8N144 294 aa20.74■□□□□ 0.91
CHD1L-209ENST00000492728 ZNF579Q8NAF0 562 aaKnown RBP20.74■□□□□ 0.91
CHD1L-209ENST00000492728 COLGALT1Q8NBJ5 622 aa20.74■□□□□ 0.91
CHD1L-209ENST00000492728 NLRP7Q8WX94 980 aa20.74■□□□□ 0.91
CHD1L-209ENST00000492728 GTF3C6Q969F1 213 aa20.74■□□□□ 0.91
CHD1L-209ENST00000492728 WNT7AO00755 349 aa20.73■□□□□ 0.91
CHD1L-209ENST00000492728 GLP2RO95838 553 aa20.73■□□□□ 0.91
CHD1L-209ENST00000492728 PBX3P40426 434 aa20.73■□□□□ 0.91
CHD1L-209ENST00000492728 NPEPPSP55786 919 aa20.73■□□□□ 0.91
CHD1L-209ENST00000492728 PSMC5P62195 406 aa20.73■□□□□ 0.91
CHD1L-209ENST00000492728 ZP2Q05996 745 aa20.73■□□□□ 0.91
CHD1L-209ENST00000492728 PUS10Q3MIT2 529 aaKnown RBP20.73■□□□□ 0.91
CHD1L-209ENST00000492728 CLLU1OSQ5K130 101 aa20.73■□□□□ 0.91
CHD1L-209ENST00000492728 SPOUT1Q5T280 376 aaKnown RBP20.73■□□□□ 0.91
CHD1L-209ENST00000492728 FAM43BQ6ZT52 329 aaPredicted RBP20.73■□□□□ 0.91
CHD1L-209ENST00000492728 ZNF598Q86UK7 904 aaKnown RBP20.73■□□□□ 0.91
CHD1L-209ENST00000492728 NSUN7Q8NE18 718 aaKnown RBP20.73■□□□□ 0.91
CHD1L-209ENST00000492728 SCLT1Q96NL6 688 aa20.73■□□□□ 0.91
CHD1L-209ENST00000492728 A0A087WZ62 844 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 FAM86C2PA6NEL3 165 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 DDX11L8A8MPP1 907 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 CCNT1O60563 726 aaKnown RBP20.72■□□□□ 0.91
CHD1L-209ENST00000492728 JAK2O60674 1132 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 FGF18O76093 207 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 RBM10P98175 930 aaKnown RBP20.72■□□□□ 0.91
CHD1L-209ENST00000492728 SPIRE1Q08AE8 756 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 ADAM15Q13444 863 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 KSR1Q8IVT5 923 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 MSLNLQ96KJ4 702 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 FAM20AQ96MK3 541 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 FDXACB1Q9BRP7 624 aaPredicted RBP20.72■□□□□ 0.91
CHD1L-209ENST00000492728 C1QTNF1Q9BXJ1 281 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 TMEM117Q9H0C3 514 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 CLEC1BQ9P126 229 aa20.72■□□□□ 0.91
CHD1L-209ENST00000492728 MBTPS2O43462 519 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 NCK2O43639 380 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 MAFO75444 373 aaPredicted RBP20.71■□□□□ 0.91
CHD1L-209ENST00000492728 GCFC2P16383 781 aaKnown RBP20.71■□□□□ 0.91
CHD1L-209ENST00000492728 NRIP1P48552 1158 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 FOSBP53539 338 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 ERVFC1P60507 584 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 ANKRD1Q15327 319 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 RBM23Q86U06 439 aaKnown RBP20.71■□□□□ 0.91
CHD1L-209ENST00000492728 RNF169Q8NCN4 708 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 VN1R2Q8NFZ6 395 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 LRFN3Q9BTN0 628 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 SUCLA2Q9P2R7 463 aaPredicted RBP20.71■□□□□ 0.91
CHD1L-209ENST00000492728 PCDHB12Q9Y5F1 795 aa20.71■□□□□ 0.91
CHD1L-209ENST00000492728 PI4K2BG5E9Z4 385 aa20.7■□□□□ 0.9
CHD1L-209ENST00000492728 FSCN2O14926 492 aa20.7■□□□□ 0.9
CHD1L-209ENST00000492728 ZSCAN20P17040 1043 aaPredicted RBP20.7■□□□□ 0.9
CHD1L-209ENST00000492728 XBP1P17861 261 aa20.7■□□□□ 0.9
CHD1L-209ENST00000492728 SSTR3P32745 418 aaPredicted RBP20.7■□□□□ 0.9
CHD1L-209ENST00000492728 QARSP47897 775 aaKnown RBP20.7■□□□□ 0.9
CHD1L-209ENST00000492728 SMAD2Q15796 467 aaKnown RBP20.7■□□□□ 0.9
CHD1L-209ENST00000492728 ERICH6BQ5W0A0 696 aa20.7■□□□□ 0.9
CHD1L-209ENST00000492728 RHPN2Q8IUC4 686 aa20.7■□□□□ 0.9
CHD1L-209ENST00000492728 THNSL1Q8IYQ7 743 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms