RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 SAMM50Q9Y512 469 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 DENND3A2RUS2 1198 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 EML1O00423 815 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 SLC37A4O43826 429 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 TBX10O75333 385 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 MAFO75444 373 aaPredicted RBP9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 CDKL5O76039 1030 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 EOMESO95936 686 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 GCFC2P16383 781 aaKnown RBP9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 GTF2F1P35269 517 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 IRS1P35568 1242 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 PSMC5P62195 406 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 PLCB3Q01970 1234 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 SPIRE1Q08AE8 756 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 COASYQ13057 564 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 DRP2Q13474 957 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 KCNC3Q14003 757 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 PDE12Q6L8Q7 609 aaKnown RBP9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 TMEM184AQ6ZMB5 413 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 ANO5Q75V66 913 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 MIER3Q7Z3K6 550 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 ECHDC2Q86YB7 292 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 ADHFE1Q8IWW8 467 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 LRRC71Q8N4P6 559 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 POF1BQ8WVV4 589 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 RSPH1Q8WYR4 309 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 FAM122AQ96E09 287 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 MAP7D2Q96T17 732 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 LRFN3Q9BTN0 628 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 TMEM117Q9H0C3 514 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 SLKQ9H2G2 1235 aaPredicted RBP9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 CHST12Q9NRB3 414 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 TYW1Q9NV66 732 aaKnown RBP9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 CLDND1Q9NY35 253 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 CLEC1BQ9P126 229 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 DDX25Q9UHL0 483 aaKnown RBP9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 LRFN2Q9ULH4 789 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 KCNJ14Q9UNX9 436 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 PPME1Q9Y570 386 aa9.43□□□□□ -0.9
SMARCB1-207ENST00000491967 C5orf42Q9H799 3197 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 ZNF318Q5VUA4 2279 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 TBKBP1A7MCY6 615 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 LINC01565O15544 149 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 HOXA2O43364 376 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 MBTPS2O43462 519 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 FGF18O76093 207 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 GLP2RO95838 553 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 FGFR1P11362 822 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 ATF7P17544 494 aaPredicted RBP9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 TBC1D8BQ0IIM8 1120 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 STK3Q13188 491 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 SMAD4Q13485 552 aaKnown RBP9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 ANKRD1Q15327 319 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 INF2Q27J81 1249 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 PAN2Q504Q3 1202 aaKnown RBP9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 ADGRD2Q7Z7M1 963 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 NEK8Q86SG6 692 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 ZNF410Q86VK4 478 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 COLGALT1Q8NBJ5 622 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 SMRP1Q8NCR6 262 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 DHX33Q9H6R0 707 aaKnown RBP9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 ATP6V0A4Q9HBG4 840 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 AAASQ9NRG9 546 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 GJB4Q9NTQ9 266 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 AKT3Q9Y243 479 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 FAM50BQ9Y247 325 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 PCDHB12Q9Y5F1 795 aa9.42□□□□□ -0.9
SMARCB1-207ENST00000491967 TECTAO75443 2155 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 MUC6Q6W4X9 2439 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 TMEM150BA6NC51 233 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 CHMP2AO43633 222 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 ZNF623O75123 536 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 P4HBP07237 508 aaKnown RBP9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 LAG3P18627 525 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 QARSP47897 775 aaKnown RBP9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 AK2P54819 239 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 ERVFC1P60507 584 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 ME3Q16798 604 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 EARS2Q5JPH6 523 aaKnown RBP9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 TMEM31Q5JXX7 168 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 CLLU1OSQ5K130 101 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 TRMT1LQ7Z2T5 733 aaKnown RBP9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 C4orf19Q8IY42 314 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 PPP1R16BQ96T49 567 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 CDCA3Q99618 268 aaPredicted RBP9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 NAP1L4Q99733 375 aaKnown RBP9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 GCOM2Q9BZD3 368 aaPredicted RBP9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 IFT122Q9HBG6 1241 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 CYP26B1Q9NR63 512 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 TLR9Q9NR96 1032 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 WRAP73Q9P2S5 460 aaPredicted RBP9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 HCSTQ9UBK5 93 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 CD207Q9UJ71 328 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 TRIOO75962 3097 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 PIEZO1Q92508 2521 aa9.41□□□□□ -0.9
SMARCB1-207ENST00000491967 ARID2Q68CP9 1835 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 A0A087WZ62 844 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 CCDC194A0A1B0GVG4 234 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms