RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TMEM117Q9H0C3 514 aa9.85□□□□□ -0.83
NUP50-217ENST00000491860 SLKQ9H2G2 1235 aaPredicted RBP9.85□□□□□ -0.83
NUP50-217ENST00000491860 NCOA5Q9HCD5 579 aaKnown RBP9.85□□□□□ -0.83
NUP50-217ENST00000491860 BRMS1Q9HCU9 246 aa9.85□□□□□ -0.83
NUP50-217ENST00000491860 CHST12Q9NRB3 414 aa9.85□□□□□ -0.83
NUP50-217ENST00000491860 DDX25Q9UHL0 483 aaKnown RBP9.85□□□□□ -0.83
NUP50-217ENST00000491860 LZTS1Q9Y250 596 aa9.85□□□□□ -0.83
NUP50-217ENST00000491860 TBKBP1A7MCY6 615 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 H3BQ06 376 aaPredicted RBP9.84□□□□□ -0.83
NUP50-217ENST00000491860 M0R2N6 131 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 CHMP2AO43633 222 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 GAS2O43903 313 aaKnown RBP9.84□□□□□ -0.83
NUP50-217ENST00000491860 VTNP04004 478 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 ITGB1P05556 798 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 SFPQP23246 707 aaKnown RBP eCLIP9.84□□□□□ -0.83
NUP50-217ENST00000491860 GPC3P51654 580 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 NLRP11P59045 1033 aaKnown RBP9.84□□□□□ -0.83
NUP50-217ENST00000491860 PSMC5P62195 406 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 SMAD2Q15796 467 aaKnown RBP9.84□□□□□ -0.83
NUP50-217ENST00000491860 PPP4R3AQ6IN85 833 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 NEK8Q86SG6 692 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 ZNF410Q86VK4 478 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 ADHFE1Q8IWW8 467 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 THNSL1Q8IYQ7 743 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 LRRC43Q8N309 656 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 EFHBQ8N7U6 833 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 SPPL3Q8TCT6 385 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 POF1BQ8WVV4 589 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 TMEM40Q8WWA1 233 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 UIMC1Q96RL1 719 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 GCOM2Q9BZD3 368 aaPredicted RBP9.84□□□□□ -0.83
NUP50-217ENST00000491860 UNC45AQ9H3U1 944 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 ALG13Q9NP73 1137 aaKnown RBP9.84□□□□□ -0.83
NUP50-217ENST00000491860 TLR9Q9NR96 1032 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 STK39Q9UEW8 545 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 SEPT9Q9UHD8 586 aaPredicted RBP9.84□□□□□ -0.83
NUP50-217ENST00000491860 CD207Q9UJ71 328 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 TRIOO75962 3097 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 ATG2AQ2TAZ0 1938 aa9.84□□□□□ -0.83
NUP50-217ENST00000491860 A0A0U1RQF3 1178 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 ZNF862O60290 1169 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 MARCH6O60337 910 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 MGEA5O60502 916 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 PFKFB2O60825 505 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 BAG4O95429 457 aaKnown RBP9.83□□□□□ -0.84
NUP50-217ENST00000491860 DARSP14868 501 aaKnown RBP9.83□□□□□ -0.84
NUP50-217ENST00000491860 NDUFV1P49821 464 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 RAB27AP51159 221 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 CLCN3P51790 818 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 PLCB3Q01970 1234 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 KRT17Q04695 432 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 HYAL1Q12794 435 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 COASYQ13057 564 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 STK3Q13188 491 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 PPP2R5CQ13362 524 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 ADAM15Q13444 863 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 DSC3Q14574 896 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 TARBP2Q15633 366 aaKnown RBP9.83□□□□□ -0.84
NUP50-217ENST00000491860 B3GNT9Q6UX72 402 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 OTUD6AQ7L8S5 288 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 TRMT1LQ7Z2T5 733 aaKnown RBP9.83□□□□□ -0.84
NUP50-217ENST00000491860 SLFN12Q8IYM2 578 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 LRRC71Q8N4P6 559 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 ETNPPLQ8TBG4 499 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 MICAL1Q8TDZ2 1067 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 NLRP7Q8WX94 980 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 SLC7A3Q8WY07 619 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 MFSD14AQ96MC6 490 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 PHF20Q9BVI0 1012 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 TRAIPQ9BWF2 469 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 ADAMTS10Q9H324 1103 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 CDHR5Q9HBB8 845 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 NGRNQ9NPE2 291 aaKnown RBP9.83□□□□□ -0.84
NUP50-217ENST00000491860 PPP4R2Q9NY27 417 aa9.83□□□□□ -0.84
NUP50-217ENST00000491860 IGKV6-21A0A0C4DH24 114 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 ADAMTS3O15072 1205 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 MBTPS2O43462 519 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 MAFO75444 373 aaPredicted RBP9.82□□□□□ -0.84
NUP50-217ENST00000491860 FGF18O76093 207 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 TDP2O95551 362 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 EYA4O95677 639 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 P4HBP07237 508 aaKnown RBP9.82□□□□□ -0.84
NUP50-217ENST00000491860 LTBRP36941 435 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 RFC5P40937 340 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 QARSP47897 775 aaKnown RBP9.82□□□□□ -0.84
NUP50-217ENST00000491860 SCRN1Q12765 414 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 PCBP1Q15365 356 aaKnown RBP eCLIP9.82□□□□□ -0.84
NUP50-217ENST00000491860 INF2Q27J81 1249 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 LETM2Q2VYF4 491 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 MTERF2Q49AM1 385 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 HERC4Q5GLZ8 1057 aaPredicted RBP9.82□□□□□ -0.84
NUP50-217ENST00000491860 BMP8AQ7Z5Y6 402 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 COLGALT1Q8NBJ5 622 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 TCP11Q8WWU5 503 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 MRPS27Q92552 414 aaKnown RBP9.82□□□□□ -0.84
NUP50-217ENST00000491860 ZNF558Q96NG5 402 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 IGFLR1Q9H665 355 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 TLE6Q9H808 572 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 KCNMB3Q9NPA1 279 aa9.82□□□□□ -0.84
NUP50-217ENST00000491860 TYW1Q9NV66 732 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms