RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-210ENST00000491824 TET1Q8NFU7 2136 aa18.41■□□□□ 0.54
HCLS1-210ENST00000491824 LAMA2P24043 3122 aaKnown RBP18.4■□□□□ 0.54
HCLS1-210ENST00000491824 IGKV6-21A0A0C4DH24 114 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 GPR32O75388 356 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 ZSCAN20P17040 1043 aaPredicted RBP18.4■□□□□ 0.54
HCLS1-210ENST00000491824 EIF4BP23588 611 aaKnown RBP18.4■□□□□ 0.54
HCLS1-210ENST00000491824 RPA1P27694 616 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 TFDP1Q14186 410 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 TCTN1Q2MV58 587 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 ARL6IP4Q66PJ3 421 aaKnown RBP18.4■□□□□ 0.54
HCLS1-210ENST00000491824 SNX29Q8TEQ0 813 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 C1orf112Q9NSG2 853 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 WRAP73Q9P2S5 460 aaPredicted RBP18.4■□□□□ 0.54
HCLS1-210ENST00000491824 ST3GAL5Q9UNP4 418 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 NOC2LQ9Y3T9 749 aaKnown RBP18.4■□□□□ 0.54
HCLS1-210ENST00000491824 COL4A3BPQ9Y5P4 624 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 WDR81Q562E7 1941 aa18.4■□□□□ 0.54
HCLS1-210ENST00000491824 ARHGEF35A5YM69 484 aa18.39■□□□□ 0.53
HCLS1-210ENST00000491824 ASAP2O43150 1006 aa18.39■□□□□ 0.53
HCLS1-210ENST00000491824 DARSP14868 501 aaKnown RBP18.39■□□□□ 0.53
HCLS1-210ENST00000491824 ATP2C1P98194 919 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-210ENST00000491824 MXD4Q14582 209 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-210ENST00000491824 FERMT3Q86UX7 667 aa18.39■□□□□ 0.53
HCLS1-210ENST00000491824 CATSPER3Q86XQ3 398 aa18.39■□□□□ 0.53
HCLS1-210ENST00000491824 MCPH1Q8NEM0 835 aa18.39■□□□□ 0.53
HCLS1-210ENST00000491824 TOP1MTQ969P6 601 aa18.39■□□□□ 0.53
HCLS1-210ENST00000491824 CDK5RAP3Q96JB5 506 aa18.39■□□□□ 0.53
HCLS1-210ENST00000491824 ZNF396Q96N95 335 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-210ENST00000491824 TSPYL2Q9H2G4 693 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-210ENST00000491824 TTYH1Q9H313 450 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-210ENST00000491824 DHX33Q9H6R0 707 aaKnown RBP18.39■□□□□ 0.53
HCLS1-210ENST00000491824 ERVK-5Q9HDB9 667 aa18.39■□□□□ 0.53
HCLS1-210ENST00000491824 BMP2KQ9NSY1 1161 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-210ENST00000491824 DBR1Q9UK59 544 aaKnown RBP18.39■□□□□ 0.53
HCLS1-210ENST00000491824 ENPP3O14638 875 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 MYOGP15173 224 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 FOSL2P15408 326 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 PHKA2P46019 1235 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
HCLS1-210ENST00000491824 POTEGQ6S5H5 508 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 NPAS4Q8IUM7 802 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 C4orf32Q8N8J7 132 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 IGSF22Q8N9C0 903 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 PIGOQ8TEQ8 1089 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 CDX2Q99626 313 aaPredicted RBP18.38■□□□□ 0.53
HCLS1-210ENST00000491824 ADAMTS10Q9H324 1103 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 CFAP45Q9UL16 551 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 STXBP5LQ9Y2K9 1186 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 MICAL3Q7RTP6 2002 aa18.38■□□□□ 0.53
HCLS1-210ENST00000491824 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.37■□□□□ 0.53
HCLS1-210ENST00000491824 USO1O60763 962 aaKnown RBP18.37■□□□□ 0.53
HCLS1-210ENST00000491824 MED24O75448 989 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 IBSPP21815 317 aaPredicted RBP18.37■□□□□ 0.53
HCLS1-210ENST00000491824 RARRES1P49788 294 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 MKRN4PQ13434 485 aaPredicted RBP18.37■□□□□ 0.53
HCLS1-210ENST00000491824 TMCO2Q7Z6W1 182 aaPredicted RBP18.37■□□□□ 0.53
HCLS1-210ENST00000491824 FAM228AQ86W67 206 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 RASSF8Q8NHQ8 419 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 TMEM40Q8WWA1 233 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 TMEM143Q96AN5 459 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 AK8Q96MA6 479 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 CEP89Q96ST8 783 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 ADAM2Q99965 735 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 OSBPL7Q9BZF2 842 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 CDHR5Q9HBB8 845 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 PCDHB7Q9Y5E2 793 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 EVPLQ92817 2033 aa18.37■□□□□ 0.53
HCLS1-210ENST00000491824 A0A087WZ62 844 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 VWA3AA6NCI4 1184 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 SPATA31C1P0DKV0 1188 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 SIP14410 1827 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 NASPP49321 788 aaPredicted RBP18.36■□□□□ 0.53
HCLS1-210ENST00000491824 SARSP49591 514 aaKnown RBP18.36■□□□□ 0.53
HCLS1-210ENST00000491824 LAMTOR4Q0VGL1 99 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 DRP2Q13474 957 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 SLC24A5Q71RS6 500 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 CATSPER4Q7RTX7 472 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 PRPF31Q8WWY3 499 aaKnown RBP18.36■□□□□ 0.53
HCLS1-210ENST00000491824 ZNF668Q96K58 619 aaPredicted RBP18.36■□□□□ 0.53
HCLS1-210ENST00000491824 GUCD1Q96NT3 240 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 SAMD11Q96NU1 681 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 TGS1Q96RS0 853 aaKnown RBP18.36■□□□□ 0.53
HCLS1-210ENST00000491824 FDXACB1Q9BRP7 624 aaPredicted RBP18.36■□□□□ 0.53
HCLS1-210ENST00000491824 NT5C3AQ9H0P0 336 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 KIAA1024Q9UPX6 916 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 DNM3Q9UQ16 869 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 RWDD3Q9Y3V2 267 aa18.36■□□□□ 0.53
HCLS1-210ENST00000491824 ZBTB39O15060 712 aa18.35■□□□□ 0.53
HCLS1-210ENST00000491824 HOXA2O43364 376 aa18.35■□□□□ 0.53
HCLS1-210ENST00000491824 GTPBP6O43824 516 aaPredicted RBP18.35■□□□□ 0.53
HCLS1-210ENST00000491824 YEATS4O95619 227 aa18.35■□□□□ 0.53
HCLS1-210ENST00000491824 SRGAP2CP0DJJ0 459 aa18.35■□□□□ 0.53
HCLS1-210ENST00000491824 SKIP12755 728 aa18.35■□□□□ 0.53
HCLS1-210ENST00000491824 HTRA4P83105 476 aaPredicted RBP18.35■□□□□ 0.53
HCLS1-210ENST00000491824 GRIN2CQ14957 1233 aa18.35■□□□□ 0.53
HCLS1-210ENST00000491824 PCBP1Q15365 356 aaKnown RBP eCLIP18.35■□□□□ 0.53
HCLS1-210ENST00000491824 ZRSR1Q15695 479 aaKnown RBP18.35■□□□□ 0.53
HCLS1-210ENST00000491824 SRGAP1Q7Z6B7 1085 aa18.35■□□□□ 0.53
HCLS1-210ENST00000491824 FIBCD1Q8N539 461 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms