RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 E2F7Q96AV8 911 aa5.65□□□□□ -1.5
RTN4-215ENST00000491592 DDX11Q96FC9 970 aa5.65□□□□□ -1.5
RTN4-215ENST00000491592 TOE1Q96GM8 510 aaKnown RBP5.65□□□□□ -1.5
RTN4-215ENST00000491592 PDGFDQ9GZP0 370 aaPredicted RBP5.65□□□□□ -1.5
RTN4-215ENST00000491592 CWC25Q9NXE8 425 aaPredicted RBP5.65□□□□□ -1.5
RTN4-215ENST00000491592 POLG2Q9UHN1 485 aa5.65□□□□□ -1.5
RTN4-215ENST00000491592 ZKSCAN5Q9Y2L8 839 aa5.65□□□□□ -1.5
RTN4-215ENST00000491592 GCC2Q8IWJ2 1684 aa5.65□□□□□ -1.51
RTN4-215ENST00000491592 MIA2Q96PC5 1412 aa5.65□□□□□ -1.51
RTN4-215ENST00000491592 FAM90A27PA6NNH2 459 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 H7C1D1 291 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 BUB1BO60566 1050 aaPredicted RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 RNASEH2AO75792 299 aaKnown RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 ZBTB48P10074 688 aaPredicted RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 ATP2A2P16615 1042 aaKnown RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 FAHP16930 419 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 GLDCP23378 1020 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 IGFBP6P24592 240 aaPredicted RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 TERF1P54274 439 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 DLG4P78352 724 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 CACNB2Q08289 660 aaPredicted RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 SART3Q15020 963 aaKnown RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 CR1LQ2VPA4 569 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 CCDC184Q52MB2 194 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 CCDC92Q53HC0 331 aaPredicted RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 GJC2Q5T442 439 aaPredicted RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 BTBD8Q5XKL5 378 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 TEPPQ6URK8 271 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 KRT77Q7Z794 578 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 CPXCR1Q8N123 301 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 FAM126AQ9BYI3 521 aaPredicted RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 PCIF1Q9H4Z3 704 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 CHST12Q9NRB3 414 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 KCNH7Q9NS40 1196 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 GTF2A1LQ9UNN4 478 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 PPP2R3BQ9Y5P8 575 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 B3GALT1Q9Y5Z6 326 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 ROCK2O75116 1388 aaKnown RBP5.64□□□□□ -1.51
RTN4-215ENST00000491592 MYOM3Q5VTT5 1437 aa5.64□□□□□ -1.51
RTN4-215ENST00000491592 SUPT6HQ7KZ85 1726 aaKnown RBP5.63□□□□□ -1.51
RTN4-215ENST00000491592 DYTNA2CJ06 578 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 ACOT7O00154 380 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 ETV2O00321 342 aaPredicted RBP5.63□□□□□ -1.51
RTN4-215ENST00000491592 PRRG2O14669 202 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 SLC26A4O43511 780 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 LRG1P02750 347 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 C4BPAP04003 597 aaKnown RBP5.63□□□□□ -1.51
RTN4-215ENST00000491592 TMEM253P0C7T8 217 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 C1QTNF9P0C862 333 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 CYP2C8P10632 490 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 ATF2P15336 505 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 ADCYAP1R1P41586 468 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 PPM1FP49593 454 aaPredicted RBP5.63□□□□□ -1.51
RTN4-215ENST00000491592 IL2P60568 153 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 STRN3Q13033 797 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 SEC23AQ15436 765 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 SLC4A10Q6U841 1118 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 CD300LDQ6UXZ3 194 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 STRA8Q7Z7C7 330 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 B3GNT8Q7Z7M8 397 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 FAM43AQ8N2R8 423 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 TTC30BQ8N4P2 665 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 FAM26EQ8N5C1 309 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 KIAA1958Q8N8K9 716 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 SMC1BQ8NDV3 1235 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 SMARCC2Q8TAQ2 1214 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 CHTF18Q8WVB6 975 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 USP7Q93009 1102 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 NGRNQ9NPE2 291 aaKnown RBP5.63□□□□□ -1.51
RTN4-215ENST00000491592 OXSMQ9NWU1 459 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 THG1LQ9NWX6 298 aaKnown RBP5.63□□□□□ -1.51
RTN4-215ENST00000491592 H2AFY2Q9P0M6 372 aaPredicted RBP5.63□□□□□ -1.51
RTN4-215ENST00000491592 ABCF2Q9UG63 623 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 PUF60Q9UHX1 559 aaKnown RBP5.63□□□□□ -1.51
RTN4-215ENST00000491592 MCM8Q9UJA3 840 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 INSRP06213 1382 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 MTUS2Q5JR59 1369 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 SPATA31E1Q6ZUB1 1445 aa5.63□□□□□ -1.51
RTN4-215ENST00000491592 TCOF1Q13428 1488 aaKnown RBP5.63□□□□□ -1.51
RTN4-215ENST00000491592 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.62□□□□□ -1.51
RTN4-215ENST00000491592 SCGB1D2O95969 90 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 IFIT2P09913 472 aaKnown RBP5.62□□□□□ -1.51
RTN4-215ENST00000491592 MED14OSP0DP75 135 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 BPIP17213 487 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 POU3F3P20264 500 aaPredicted RBP5.62□□□□□ -1.51
RTN4-215ENST00000491592 SCP2P22307 547 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 LIMS1P48059 325 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 LSSP48449 732 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 CDKN1CP49918 316 aaPredicted RBP5.62□□□□□ -1.51
RTN4-215ENST00000491592 SCNN1BP51168 640 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 KIF11P52732 1056 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 NKX3-2P78367 333 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 ZNF174Q15697 407 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 CD276Q5ZPR3 534 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 DLG3Q92796 817 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 ERP27Q96DN0 273 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 TRIM44Q96DX7 344 aaPredicted RBP5.62□□□□□ -1.51
RTN4-215ENST00000491592 SIGLEC10Q96LC7 697 aa5.62□□□□□ -1.51
RTN4-215ENST00000491592 GPR101Q96P66 508 aaPredicted RBP5.62□□□□□ -1.51
RTN4-215ENST00000491592 RETREG1Q9H6L5 497 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms