RNA–Protein interactions for RNA: ENST00000491429.1

SCN1A-206, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 542 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-206ENST00000491429 RBM25P49756 843 aaKnown RBP6.57□□□□□ -1.36
SCN1A-206ENST00000491429 ALDH6A1Q02252 535 aaKnown RBP6.57□□□□□ -1.36
SCN1A-206ENST00000491429 FAM111BQ6SJ93 734 aa6.57□□□□□ -1.36
SCN1A-206ENST00000491429 RTN4RL1Q86UN2 441 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-206ENST00000491429 VRK3Q8IV63 474 aa6.57□□□□□ -1.36
SCN1A-206ENST00000491429 HAS1Q92839 578 aa6.57□□□□□ -1.36
SCN1A-206ENST00000491429 GCDHQ92947 438 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-206ENST00000491429 FOXRED1Q96CU9 486 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-206ENST00000491429 DHRS4Q9BTZ2 278 aa6.57□□□□□ -1.36
SCN1A-206ENST00000491429 SLC52A2Q9HAB3 445 aa6.57□□□□□ -1.36
SCN1A-206ENST00000491429 SAE1Q9UBE0 346 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-206ENST00000491429 DENND2AQ9ULE3 1009 aa6.57□□□□□ -1.36
SCN1A-206ENST00000491429 MRPS23Q9Y3D9 190 aaKnown RBP6.57□□□□□ -1.36
SCN1A-206ENST00000491429 KLRG2A4D1S0 409 aaPredicted RBP6.56□□□□□ -1.36
SCN1A-206ENST00000491429 CCDC85CA6NKD9 419 aa6.56□□□□□ -1.36
SCN1A-206ENST00000491429 GCP02774 474 aa6.56□□□□□ -1.36
SCN1A-206ENST00000491429 RABGGTBP53611 331 aa6.56□□□□□ -1.36
SCN1A-206ENST00000491429 ANTXR2P58335 489 aa6.56□□□□□ -1.36
SCN1A-206ENST00000491429 TCIRG1Q13488 830 aa6.56□□□□□ -1.36
SCN1A-206ENST00000491429 RASGRF1Q13972 1273 aa6.56□□□□□ -1.36
SCN1A-206ENST00000491429 OVCH1Q7RTY7 1134 aa6.56□□□□□ -1.36
SCN1A-206ENST00000491429 SLC25A43Q8WUT9 341 aaPredicted RBP6.56□□□□□ -1.36
SCN1A-206ENST00000491429 PGBD4Q96DM1 585 aa6.56□□□□□ -1.36
SCN1A-206ENST00000491429 NDOR1Q9UHB4 597 aa6.56□□□□□ -1.36
SCN1A-206ENST00000491429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.55□□□□□ -1.36
SCN1A-206ENST00000491429 SLC12A8A0AV02 714 aa6.55□□□□□ -1.36
SCN1A-206ENST00000491429 GOLGA8BA8MQT2 603 aa6.55□□□□□ -1.36
SCN1A-206ENST00000491429 LMO1P25800 156 aa6.55□□□□□ -1.36
SCN1A-206ENST00000491429 SESN2P58004 480 aaPredicted RBP6.55□□□□□ -1.36
SCN1A-206ENST00000491429 ELOA2Q8IYF1 753 aaPredicted RBP6.55□□□□□ -1.36
SCN1A-206ENST00000491429 GFM2Q969S9 779 aaKnown RBP6.55□□□□□ -1.36
SCN1A-206ENST00000491429 FOXB1Q99853 325 aa6.55□□□□□ -1.36
SCN1A-206ENST00000491429 MLST8Q9BVC4 326 aa6.55□□□□□ -1.36
SCN1A-206ENST00000491429 CELF4Q9BZC1 486 aaKnown RBP6.55□□□□□ -1.36
SCN1A-206ENST00000491429 IL23AQ9NPF7 189 aa6.55□□□□□ -1.36
SCN1A-206ENST00000491429 TRPS1Q9UHF7 1281 aa6.55□□□□□ -1.36
SCN1A-206ENST00000491429 RABL3Q5HYI8 236 aa6.54□□□□□ -1.36
SCN1A-206ENST00000491429 C1QL3Q5VWW1 255 aa6.54□□□□□ -1.36
SCN1A-206ENST00000491429 RHOUQ7L0Q8 258 aa6.54□□□□□ -1.36
SCN1A-206ENST00000491429 ZNF276Q8N554 614 aa6.54□□□□□ -1.36
SCN1A-206ENST00000491429 OR5AN1Q8NGI8 311 aa6.54□□□□□ -1.36
SCN1A-206ENST00000491429 NKD2Q969F2 451 aaPredicted RBP6.54□□□□□ -1.36
SCN1A-206ENST00000491429 TCF25Q9BQ70 676 aa6.54□□□□□ -1.36
SCN1A-206ENST00000491429 NUDT3O95989 172 aa6.53□□□□□ -1.36
SCN1A-206ENST00000491429 NR4A1P22736 598 aa6.53□□□□□ -1.36
SCN1A-206ENST00000491429 RGS3P49796 1198 aa6.53□□□□□ -1.36
SCN1A-206ENST00000491429 SMAD3P84022 425 aaKnown RBP6.53□□□□□ -1.36
SCN1A-206ENST00000491429 CCDC142Q17RM4 750 aa6.53□□□□□ -1.36
SCN1A-206ENST00000491429 FKBP15Q5T1M5 1219 aa6.53□□□□□ -1.36
SCN1A-206ENST00000491429 MB21D1Q8N884 522 aa6.53□□□□□ -1.36
SCN1A-206ENST00000491429 GSTCDQ8NEC7 633 aa6.53□□□□□ -1.36
SCN1A-206ENST00000491429 LENG9Q96B70 501 aa6.53□□□□□ -1.36
SCN1A-206ENST00000491429 HIP1RO75146 1068 aa6.52□□□□□ -1.37
SCN1A-206ENST00000491429 LMNAP02545 664 aaKnown RBP6.52□□□□□ -1.37
SCN1A-206ENST00000491429 FBLP22087 321 aaKnown RBP6.52□□□□□ -1.37
SCN1A-206ENST00000491429 IRF9Q00978 393 aa6.52□□□□□ -1.37
SCN1A-206ENST00000491429 ABHD17CQ6PCB6 329 aa6.52□□□□□ -1.37
SCN1A-206ENST00000491429 HTR3DQ70Z44 454 aa6.52□□□□□ -1.37
SCN1A-206ENST00000491429 SLC7A14Q8TBB6 771 aa6.52□□□□□ -1.37
SCN1A-206ENST00000491429 ATXN2LQ8WWM7 1075 aaKnown RBP6.52□□□□□ -1.37
SCN1A-206ENST00000491429 SCLYQ96I15 445 aa6.52□□□□□ -1.37
SCN1A-206ENST00000491429 MNTQ99583 582 aa6.52□□□□□ -1.37
SCN1A-206ENST00000491429 GRXCR1A8MXD5 290 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 TOX4O94842 621 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 PRLP01236 227 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 ZBTB48P10074 688 aaPredicted RBP6.51□□□□□ -1.37
SCN1A-206ENST00000491429 KCNA6P17658 529 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 SLC6A3Q01959 620 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 GAGE13Q4V321 117 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 CLEC14AQ86T13 490 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 CKAP2LQ8IYA6 745 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 CCDC113Q9H0I3 377 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 RCAN3Q9UKA8 241 aa6.51□□□□□ -1.37
SCN1A-206ENST00000491429 DGKDQ16760 1214 aa6.5□□□□□ -1.37
SCN1A-206ENST00000491429 TMEM177Q53S58 311 aa6.5□□□□□ -1.37
SCN1A-206ENST00000491429 C2orf69Q8N8R5 385 aa6.5□□□□□ -1.37
SCN1A-206ENST00000491429 IGSF22Q8N9C0 903 aa6.5□□□□□ -1.37
SCN1A-206ENST00000491429 PLA2G15Q8NCC3 412 aa6.5□□□□□ -1.37
SCN1A-206ENST00000491429 PROKR1Q8TCW9 393 aa6.5□□□□□ -1.37
SCN1A-206ENST00000491429 MAGEB10Q96LZ2 347 aaPredicted RBP6.5□□□□□ -1.37
SCN1A-206ENST00000491429 PACSIN3Q9UKS6 424 aa6.5□□□□□ -1.37
SCN1A-206ENST00000491429 KDM2BQ8NHM5 1336 aa6.5□□□□□ -1.37
SCN1A-206ENST00000491429 GRID2IPA4D2P6 1211 aa6.49□□□□□ -1.37
SCN1A-206ENST00000491429 EFCAB14O75071 495 aa6.49□□□□□ -1.37
SCN1A-206ENST00000491429 STK10O94804 968 aaKnown RBP6.49□□□□□ -1.37
SCN1A-206ENST00000491429 VSIG10L2P0DP72 767 aa6.49□□□□□ -1.37
SCN1A-206ENST00000491429 KRT40Q6A162 431 aa6.49□□□□□ -1.37
SCN1A-206ENST00000491429 CC2D1AQ6P1N0 951 aaPredicted RBP6.49□□□□□ -1.37
SCN1A-206ENST00000491429 SYNE4Q8N205 404 aa6.49□□□□□ -1.37
SCN1A-206ENST00000491429 NTN5Q8WTR8 489 aaPredicted RBP6.49□□□□□ -1.37
SCN1A-206ENST00000491429 ZNF512Q96ME7 567 aaPredicted RBP6.49□□□□□ -1.37
SCN1A-206ENST00000491429 FZD1Q9UP38 647 aa6.49□□□□□ -1.37
SCN1A-206ENST00000491429 GOLGA6L6A8MZA4 724 aa6.48□□□□□ -1.37
SCN1A-206ENST00000491429 KRT37O76014 449 aa6.48□□□□□ -1.37
SCN1A-206ENST00000491429 RHOBTB3O94955 611 aa6.48□□□□□ -1.37
SCN1A-206ENST00000491429 MRPS21P82921 87 aaKnown RBP6.48□□□□□ -1.37
SCN1A-206ENST00000491429 ROM1Q03395 351 aa6.48□□□□□ -1.37
SCN1A-206ENST00000491429 MDGA1Q8NFP4 955 aa6.48□□□□□ -1.37
SCN1A-206ENST00000491429 ZNF764Q96H86 408 aaPredicted RBP6.48□□□□□ -1.37
SCN1A-206ENST00000491429 RIOX1Q9H6W3 641 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms