RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 KRT17Q04695 432 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 TARBP2Q15633 366 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 UGCGQ16739 394 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 TCEAL5Q5H9L2 206 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 PDE12Q6L8Q7 609 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 RHPN2Q8IUC4 686 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 DIS3L2Q8IYB7 885 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 THNSL1Q8IYQ7 743 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 RNF169Q8NCN4 708 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 NEK9Q8TD19 979 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 GJA10Q969M2 543 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 TMEM117Q9H0C3 514 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 ADAMTS10Q9H324 1103 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 RC3H2Q9HBD1 1191 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 CYP26B1Q9NR63 512 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 CLDND1Q9NY35 253 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 MICAL3Q7RTP6 2002 aa18.54■□□□□ 0.56
PDLIM2-217ENST00000491330 LAMA2P24043 3122 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 ASAP2O43150 1006 aa18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 MAFO75444 373 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 CTDNEP1O95476 244 aa18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 SRGAP2BP0DMP2 458 aa18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 PPM1AP35813 382 aa18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 FAM189BP81408 668 aa18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 B3GNT9Q6UX72 402 aa18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 C4orf19Q8IY42 314 aa18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 NSUN7Q8NE18 718 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 PSPC1Q8WXF1 523 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 C8orf76Q96K31 380 aa18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 C1QTNF1Q9BXJ1 281 aa18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 MRPL9Q9BYD2 267 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 SH2B1Q9NRF2 756 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-217ENST00000491330 MYH9P35579 1960 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 GRM6O15303 877 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 EDIL3O43854 480 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 NEMFO60524 1076 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 YWHABP31946 246 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 TWF2Q6IBS0 349 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 PTCRAQ6ISU1 281 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 CATSPER4Q7RTX7 472 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 TPH2Q8IWU9 490 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 LRRC43Q8N309 656 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 LINC01465Q8N7H1 131 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 KLHL23Q8NBE8 558 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 OXER1Q8TDS5 423 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 NLRP4Q96MN2 994 aa18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 ALG13Q9NP73 1137 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-217ENST00000491330 PRRC2BQ5JSZ5 2229 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 A0A0U1RQF3 1178 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 MGEA5O60502 916 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 RAB27AP51159 221 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 NR5A1Q13285 461 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 TFDP1Q14186 410 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 RABEP1Q15276 862 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 XKR9Q5GH70 373 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 CRIPAKQ8N1N5 446 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 TMEM87AQ8NBN3 555 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 ERMNQ8TAM6 284 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 POF1BQ8WVV4 589 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 PGBD4Q96DM1 585 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 LXNQ9BS40 222 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 IGFLR1Q9H665 355 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 TTC12Q9H892 705 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 VAV3Q9UKW4 847 aa18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 NOL7Q9UMY1 257 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-217ENST00000491330 CUL9Q8IWT3 2517 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 A0A087WZ62 844 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 IGKV6-21A0A0C4DH24 114 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 BTBD18B2RXH4 712 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 ST18O60284 1047 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 FDPSP14324 419 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 SSTR3P32745 418 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 TXKP42681 527 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 ORC2Q13416 577 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 DSC3Q14574 896 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 MXD4Q14582 209 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 PCBP1Q15365 356 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 FAM102BQ5T8I3 360 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 ANO5Q75V66 913 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 ECHDC2Q86YB7 292 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 SPPL3Q8TCT6 385 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 ZNF668Q96K58 619 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 ZNF558Q96NG5 402 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 FDXACB1Q9BRP7 624 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 GJB4Q9NTQ9 266 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 TYW1Q9NV66 732 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 PIN4Q9Y237 131 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 COL4A3BPQ9Y5P4 624 aa18.5■□□□□ 0.55
PDLIM2-217ENST00000491330 EML1O00423 815 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 CSPG5O95196 566 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 ITGB1P05556 798 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 ALDH7A1P49419 539 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 NDUFV1P49821 464 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 FOSBP53539 338 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 PLA2G4FQ68DD2 849 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 SRGAP1Q7Z6B7 1085 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 CCDC83Q8IWF9 413 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 HAS1Q92839 578 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 DYDC2Q96IM9 177 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms