RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ABI1Q8IZP0 508 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 NSUN7Q8NE18 718 aaKnown RBP11.66□□□□□ -0.54
TTC28-207ENST00000490475 POF1BQ8WVV4 589 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 ZBTB10Q96DT7 871 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 ZSCAN31Q96LW9 406 aaPredicted RBP11.66□□□□□ -0.54
TTC28-207ENST00000490475 OSMRQ99650 979 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 NAP1L4Q99733 375 aaKnown RBP11.66□□□□□ -0.54
TTC28-207ENST00000490475 INO80BQ9C086 356 aaPredicted RBP11.66□□□□□ -0.54
TTC28-207ENST00000490475 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 KCNH6Q9H252 994 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 PCDHA4Q9UN74 947 aa11.66□□□□□ -0.54
TTC28-207ENST00000490475 KIAA1671Q9BY89 1806 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 ATG2AQ2TAZ0 1938 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 CYP3A7-CYP3A51PA0A087WV96 503 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 TBKBP1A7MCY6 615 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 MSH4O15457 936 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 MBTPS2O43462 519 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 EYA4O95677 639 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 EOMESO95936 686 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 SKIP12755 728 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 CYP3A7P24462 503 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 LTBRP36941 435 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 NLRP11P59045 1033 aaKnown RBP11.65□□□□□ -0.54
TTC28-207ENST00000490475 PRKCEQ02156 737 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 KRT17Q04695 432 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 NPY5RQ15761 445 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 THNSL1Q8IYQ7 743 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 BLIDQ8IZY5 108 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 DAGLBQ8NCG7 672 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 MICAL1Q8TDZ2 1067 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 TBCKQ8TEA7 893 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 TMEM40Q8WWA1 233 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 SLC5A5Q92911 643 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 LENG9Q96B70 501 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 SCLT1Q96NL6 688 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 MRPL9Q9BYD2 267 aaKnown RBP11.65□□□□□ -0.54
TTC28-207ENST00000490475 TLR9Q9NR96 1032 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 CHST12Q9NRB3 414 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 PPME1Q9Y570 386 aa11.65□□□□□ -0.54
TTC28-207ENST00000490475 STK36Q9NRP7 1315 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 EDIL3O43854 480 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 ST18O60284 1047 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 VTNP04004 478 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 GCFC2P16383 781 aaKnown RBP11.64□□□□□ -0.55
TTC28-207ENST00000490475 FOSBP53539 338 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 PLCB3Q01970 1234 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 COASYQ13057 564 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 NONOQ15233 471 aaKnown RBP eCLIP11.64□□□□□ -0.55
TTC28-207ENST00000490475 MIER3Q7Z3K6 550 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 FAM228AQ86W67 206 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 LRRC43Q8N309 656 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 UIMC1Q96RL1 719 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 PHF20Q9BVI0 1012 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 NIFKQ9BYG3 293 aaKnown RBP11.64□□□□□ -0.55
TTC28-207ENST00000490475 GCOM2Q9BZD3 368 aaPredicted RBP11.64□□□□□ -0.55
TTC28-207ENST00000490475 IGFLR1Q9H665 355 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 TLE6Q9H808 572 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 CDHR5Q9HBB8 845 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 NGRNQ9NPE2 291 aaKnown RBP11.64□□□□□ -0.55
TTC28-207ENST00000490475 CD320Q9NPF0 282 aa11.64□□□□□ -0.55
TTC28-207ENST00000490475 M0R2N6 131 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 MGEA5O60502 916 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 PSMD10O75832 226 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 FGF18O76093 207 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 DARSP14868 501 aaKnown RBP11.63□□□□□ -0.55
TTC28-207ENST00000490475 SFPQP23246 707 aaKnown RBP eCLIP11.63□□□□□ -0.551e-10■■■■■ 37.9
TTC28-207ENST00000490475 CLCN3P51790 818 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 CAMK1Q14012 370 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 DSC3Q14574 896 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 TRMT1LQ7Z2T5 733 aaKnown RBP11.63□□□□□ -0.55
TTC28-207ENST00000490475 ZNF410Q86VK4 478 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 LINC01465Q8N7H1 131 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 COLGALT1Q8NBJ5 622 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 SMRP1Q8NCR6 262 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 OXER1Q8TDS5 423 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 NLRP7Q8WX94 980 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 WASF1Q92558 559 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 MSLNLQ96KJ4 702 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 FAM20AQ96MK3 541 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 ADAMTS10Q9H324 1103 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 SH2B1Q9NRF2 756 aaPredicted RBP11.63□□□□□ -0.55
TTC28-207ENST00000490475 TYW1Q9NV66 732 aaKnown RBP11.63□□□□□ -0.55
TTC28-207ENST00000490475 STK39Q9UEW8 545 aa11.63□□□□□ -0.55
TTC28-207ENST00000490475 PLXNA4Q9HCM2 1894 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 A0A0U1RQF3 1178 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 CCDC194A0A1B0GVG4 234 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 TBX3O15119 743 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 CHMP2AO43633 222 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 GAS2O43903 313 aaKnown RBP11.62□□□□□ -0.55
TTC28-207ENST00000490475 ZNF862O60290 1169 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 TBX10O75333 385 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 ATF7P17544 494 aaPredicted RBP11.62□□□□□ -0.55
TTC28-207ENST00000490475 NRIP1P48552 1158 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 RAB27AP51159 221 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 GPC3P51654 580 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 PSMC5P62195 406 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 TARBP2Q15633 366 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms