RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 MAFO75444 373 aaPredicted RBP19.53■□□□□ 0.72
SEC13-218ENST00000490283 STBD1O95210 358 aa19.53■□□□□ 0.72
SEC13-218ENST00000490283 DARSP14868 501 aaKnown RBP19.53■□□□□ 0.72
SEC13-218ENST00000490283 ATP2B1P20020 1258 aa19.53■□□□□ 0.72
SEC13-218ENST00000490283 YWHABP31946 246 aaKnown RBP19.53■□□□□ 0.72
SEC13-218ENST00000490283 RFC5P40937 340 aa19.53■□□□□ 0.72
SEC13-218ENST00000490283 ZNF410Q86VK4 478 aa19.53■□□□□ 0.72
SEC13-218ENST00000490283 NEK9Q8TD19 979 aa19.53■□□□□ 0.72
SEC13-218ENST00000490283 CLP1Q92989 425 aaKnown RBP19.53■□□□□ 0.72
SEC13-218ENST00000490283 DYDC2Q96IM9 177 aa19.53■□□□□ 0.72
SEC13-218ENST00000490283 ZNF668Q96K58 619 aaPredicted RBP19.53■□□□□ 0.72
SEC13-218ENST00000490283 PLVAPQ9BX97 442 aa19.53■□□□□ 0.72
SEC13-218ENST00000490283 FOXP1Q9H334 677 aaPredicted RBP19.53■□□□□ 0.72
SEC13-218ENST00000490283 TTC12Q9H892 705 aaPredicted RBP19.53■□□□□ 0.72
SEC13-218ENST00000490283 ATP6V0A4Q9HBG4 840 aa19.53■□□□□ 0.72
SEC13-218ENST00000490283 PRRC2BQ5JSZ5 2229 aaKnown RBP19.53■□□□□ 0.72
SEC13-218ENST00000490283 IGKV6-21A0A0C4DH24 114 aa19.52■□□□□ 0.72
SEC13-218ENST00000490283 C9IYK1 514 aa19.52■□□□□ 0.72
SEC13-218ENST00000490283 SFPQP23246 707 aaKnown RBP eCLIP19.52■□□□□ 0.72
SEC13-218ENST00000490283 TXKP42681 527 aa19.52■□□□□ 0.72
SEC13-218ENST00000490283 CYP4A11Q02928 519 aa19.52■□□□□ 0.72
SEC13-218ENST00000490283 SPOUT1Q5T280 376 aaKnown RBP19.52■□□□□ 0.72
SEC13-218ENST00000490283 RHPN2Q8IUC4 686 aa19.52■□□□□ 0.72
SEC13-218ENST00000490283 TPH2Q8IWU9 490 aa19.52■□□□□ 0.72
SEC13-218ENST00000490283 ELAC1Q9H777 363 aaKnown RBP19.52■□□□□ 0.72
SEC13-218ENST00000490283 TMEM161AQ9NX61 479 aa19.52■□□□□ 0.72
SEC13-218ENST00000490283 RGL1Q9NZL6 768 aa19.52■□□□□ 0.72
SEC13-218ENST00000490283 TTC3P53804 2025 aa19.52■□□□□ 0.72
SEC13-218ENST00000490283 EVPLQ92817 2033 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 HOXA2O43364 376 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 GAS2O43903 313 aaKnown RBP19.51■□□□□ 0.71
SEC13-218ENST00000490283 MCM7P33993 719 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 SPIRE1Q08AE8 756 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 ORC2Q13416 577 aaPredicted RBP19.51■□□□□ 0.71
SEC13-218ENST00000490283 DRP2Q13474 957 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 CTTNQ14247 550 aaKnown RBP19.51■□□□□ 0.71
SEC13-218ENST00000490283 XKR9Q5GH70 373 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 CRIPAKQ8N1N5 446 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 FBXO18Q8NFZ0 1043 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 NLRP4Q96MN2 994 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 CEP89Q96ST8 783 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 EIF2AK1Q9BQI3 630 aaKnown RBP19.51■□□□□ 0.71
SEC13-218ENST00000490283 LMAN2LQ9H0V9 348 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 AAASQ9NRG9 546 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 DACT1Q9NYF0 836 aa19.51■□□□□ 0.71
SEC13-218ENST00000490283 NOL7Q9UMY1 257 aaKnown RBP19.51■□□□□ 0.71
SEC13-218ENST00000490283 MRPL42Q9Y6G3 142 aaKnown RBP19.51■□□□□ 0.71
SEC13-218ENST00000490283 A0A087WZ62 844 aa19.5■□□□□ 0.71
SEC13-218ENST00000490283 TBKBP1A7MCY6 615 aa19.5■□□□□ 0.71
SEC13-218ENST00000490283 NPEPPSP55786 919 aa19.5■□□□□ 0.71
SEC13-218ENST00000490283 DSC3Q14574 896 aa19.5■□□□□ 0.71
SEC13-218ENST00000490283 NAALADL2Q58DX5 795 aa19.5■□□□□ 0.71
SEC13-218ENST00000490283 ABI1Q8IZP0 508 aa19.5■□□□□ 0.71
SEC13-218ENST00000490283 TCP11Q8WWU5 503 aa19.5■□□□□ 0.71
SEC13-218ENST00000490283 PSPC1Q8WXF1 523 aaKnown RBP19.5■□□□□ 0.71
SEC13-218ENST00000490283 P2RX5Q93086 422 aa19.5■□□□□ 0.71
SEC13-218ENST00000490283 FDXACB1Q9BRP7 624 aaPredicted RBP19.5■□□□□ 0.71
SEC13-218ENST00000490283 EYSQ5T1H1 3165 aa19.49■□□□□ 0.71
SEC13-218ENST00000490283 TFF2Q03403 129 aa19.49■□□□□ 0.71
SEC13-218ENST00000490283 NOSTRINQ8IVI9 506 aa19.49■□□□□ 0.71
SEC13-218ENST00000490283 NSUN3Q9H649 340 aaKnown RBP19.49■□□□□ 0.71
SEC13-218ENST00000490283 DHX33Q9H6R0 707 aaKnown RBP19.49■□□□□ 0.71
SEC13-218ENST00000490283 CHST12Q9NRB3 414 aa19.49■□□□□ 0.71
SEC13-218ENST00000490283 WRAP73Q9P2S5 460 aaPredicted RBP19.49■□□□□ 0.71
SEC13-218ENST00000490283 COL4A3BPQ9Y5P4 624 aa19.49■□□□□ 0.71
SEC13-218ENST00000490283 SLITRK3O94933 977 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 FGFR4P22455 802 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 TRAPPC10P48553 1259 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 MCM2P49736 904 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 GATMP50440 423 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 FAM189BP81408 668 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 EMC2Q15006 297 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 RNF169Q8NCN4 708 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 ERMNQ8TAM6 284 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 PPP2R3CQ969Q6 453 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 MTMR9Q96QG7 549 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 MTRQ99707 1265 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 PCDHB12Q9Y5F1 795 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 UNC80Q8N2C7 3258 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 RALGAPA2Q2PPJ7 1873 aa19.48■□□□□ 0.71
SEC13-218ENST00000490283 WDR81Q562E7 1941 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 WNT7AO00755 349 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 ASAP2O43150 1006 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 LYPLA2O95372 231 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 OR52Z1P0C646 297 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 LINC00271P0C7V0 271 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 FGFR1P11362 822 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 CSPP1Q1MSJ5 1256 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 TTC38Q5R3I4 469 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 FAM102BQ5T8I3 360 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 CATSPER4Q7RTX7 472 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 ECHDC2Q86YB7 292 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 ADAMTS19Q8TE59 1207 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 TMEM143Q96AN5 459 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 HSD17B14Q9BPX1 270 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 TMEM117Q9H0C3 514 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 UBE2ZQ9H832 354 aaPredicted RBP19.47■□□□□ 0.71
SEC13-218ENST00000490283 BMP2KQ9NSY1 1161 aaPredicted RBP19.47■□□□□ 0.71
SEC13-218ENST00000490283 ANKEF1Q9NU02 776 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 PIN4Q9Y237 131 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 330.4 ms