RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 MSX2P35548 267 aaPredicted RBP5.66□□□□□ -1.5
HMGN1-218ENST00000490032 ADCY7P51828 1080 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 ADCY1Q08828 1119 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 FOXE3Q13461 319 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 MIIPQ5JXC2 388 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 ESRP1Q6NXG1 681 aaKnown RBP5.66□□□□□ -1.5
HMGN1-218ENST00000490032 ADGRE4PQ86SQ3 457 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 ZNF808Q8N4W9 903 aaPredicted RBP5.66□□□□□ -1.5
HMGN1-218ENST00000490032 SLC7A6OSQ96CW6 309 aaPredicted RBP5.66□□□□□ -1.5
HMGN1-218ENST00000490032 ELF4Q99607 663 aaPredicted RBP5.66□□□□□ -1.5
HMGN1-218ENST00000490032 SLC6A15Q9H2J7 730 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 OXSMQ9NWU1 459 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 SRRDQ9UH36 339 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 DENND2AQ9ULE3 1009 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 C2orf78A6NCI8 922 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 FZD7O75084 574 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 ATP2A2P16615 1042 aaKnown RBP5.65□□□□□ -1.5
HMGN1-218ENST00000490032 SLC9A1P19634 815 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 GDF5P43026 501 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 BCAR1P56945 870 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 ADAM8P78325 824 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 RIN1Q13671 783 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 SAFB2Q14151 953 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGN1-218ENST00000490032 GRM7Q14831 915 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 MYBPC3Q14896 1274 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 USP39Q53GS9 565 aaKnown RBP5.65□□□□□ -1.5
HMGN1-218ENST00000490032 C16orf86Q6ZW13 317 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 KANSL1Q7Z3B3 1105 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 BMP8AQ7Z5Y6 402 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 ZNF503Q96F45 646 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 TUBGCP5Q96RT8 1024 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 PITHD1Q9GZP4 211 aaPredicted RBP5.65□□□□□ -1.5
HMGN1-218ENST00000490032 SCAND2PQ9GZW5 306 aaPredicted RBP5.65□□□□□ -1.5
HMGN1-218ENST00000490032 MAGEL2Q9UJ55 1249 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 CD2APQ9Y5K6 639 aa5.65□□□□□ -1.5
HMGN1-218ENST00000490032 CYR61O00622 381 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 F2P00734 622 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 ACRV1P26436 265 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 ATP2C1P98194 919 aaPredicted RBP5.64□□□□□ -1.51
HMGN1-218ENST00000490032 DSG1Q02413 1049 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 TKFCQ3LXA3 575 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 PRAMEF9Q5VWM5 478 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 PHYKPLQ8IUZ5 450 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 APPBP2Q92624 585 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 EXTL1Q92935 676 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 NINJ1Q92982 152 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 SORCS2Q96PQ0 1159 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 MPHOSPH9Q99550 1183 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 MTFR1LQ9H019 292 aa5.64□□□□□ -1.51
HMGN1-218ENST00000490032 NRN1LQ496H8 165 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 GAGE13Q4V321 117 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 CLEC14AQ86T13 490 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 LRRTM3Q86VH5 581 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 ZZZ3Q8IYH5 903 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 EFHBQ8N7U6 833 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 RPGRQ92834 1020 aaKnown RBP5.63□□□□□ -1.51
HMGN1-218ENST00000490032 GCDHQ92947 438 aaPredicted RBP5.63□□□□□ -1.51
HMGN1-218ENST00000490032 DYDC2Q96IM9 177 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 GPHA2Q96T91 129 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 ZMAT4Q9H898 229 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 TLR9Q9NR96 1032 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 POLR3BQ9NW08 1133 aaPredicted RBP5.63□□□□□ -1.51
HMGN1-218ENST00000490032 FANCLQ9NW38 375 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 ZKSCAN5Q9Y2L8 839 aa5.63□□□□□ -1.51
HMGN1-218ENST00000490032 A0A0A6YYJ9 748 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 PRPF6O94906 941 aaKnown RBP5.62□□□□□ -1.51
HMGN1-218ENST00000490032 STAT3P40763 770 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 ADCY2Q08462 1091 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 TCIRG1Q13488 830 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 LRRC32Q14392 662 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 SPTY2D1Q68D10 685 aaPredicted RBP5.62□□□□□ -1.51
HMGN1-218ENST00000490032 USP51Q70EK9 711 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 D2HGDHQ8N465 521 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 C7orf31Q8N865 590 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 IL17DQ8TAD2 202 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 WDR92Q96MX6 357 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 TOMM22Q9NS69 142 aa5.62□□□□□ -1.51
HMGN1-218ENST00000490032 AURKAIP1Q9NWT8 199 aaPredicted RBP5.62□□□□□ -1.51
HMGN1-218ENST00000490032 H2AFY2Q9P0M6 372 aaPredicted RBP5.62□□□□□ -1.51
HMGN1-218ENST00000490032 RBM8AQ9Y5S9 174 aaKnown RBP5.62□□□□□ -1.51
HMGN1-218ENST00000490032 A0A1W2PRX2 142 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 KPNA6O60684 536 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 GAS7O60861 476 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 SLPIP03973 132 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 HIBADHP31937 336 aaKnown RBP5.61□□□□□ -1.51
HMGN1-218ENST00000490032 BPIFB4P59827 614 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 HHEXQ03014 270 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 ACAP1Q15027 740 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 C21orf62-AS1Q17RA5 79 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 KIAA1841Q6NSI8 718 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 TIGD7Q6NT04 549 aaPredicted RBP5.61□□□□□ -1.51
HMGN1-218ENST00000490032 C1orf210Q8IVY1 113 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 NIM1KQ8IY84 436 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 NXPE1Q8N323 547 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 ANKRD53Q8N9V6 530 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 PLA2G15Q8NCC3 412 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 TMEM176AQ96HP8 235 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 MYL10Q9BUA6 226 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 KRTAP17-1Q9BYP8 105 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms