RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 SUCLA2Q9P2R7 463 aaPredicted RBP16.04■□□□□ 0.16
HLA-F-229ENST00000489502 CFAP45Q9UL16 551 aa16.04■□□□□ 0.16
HLA-F-229ENST00000489502 DNM3Q9UQ16 869 aa16.04■□□□□ 0.16
HLA-F-229ENST00000489502 ATP6V1DQ9Y5K8 247 aa16.04■□□□□ 0.16
HLA-F-229ENST00000489502 PTPRSQ13332 1948 aa16.04■□□□□ 0.16
HLA-F-229ENST00000489502 GPR32O75388 356 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 PARNO95453 639 aaKnown RBP16.03■□□□□ 0.16
HLA-F-229ENST00000489502 EYA4O95677 639 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 PFKMP08237 780 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
HLA-F-229ENST00000489502 DNM2P50570 870 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 RPUSD2Q8IZ73 545 aaKnown RBP16.03■□□□□ 0.16
HLA-F-229ENST00000489502 TDHQ8IZJ6 230 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 DBF4BQ8NFT6 615 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 ASAP3Q8TDY4 903 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 LEO1Q8WVC0 666 aaPredicted RBP16.03■□□□□ 0.16
HLA-F-229ENST00000489502 NLRP7Q8WX94 980 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 PSPC1Q8WXF1 523 aaKnown RBP16.03■□□□□ 0.16
HLA-F-229ENST00000489502 RUSC1Q9BVN2 902 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 CCSER1Q9C0I3 900 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 NT5C3AQ9H0P0 336 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 POLR3FQ9H1D9 316 aaPredicted RBP16.03■□□□□ 0.16
HLA-F-229ENST00000489502 ADAMTS10Q9H324 1103 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 AGO3Q9H9G7 860 aaKnown RBP16.03■□□□□ 0.16
HLA-F-229ENST00000489502 GDPD2Q9HCC8 539 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 CXXC1Q9P0U4 656 aaPredicted RBP16.03■□□□□ 0.16
HLA-F-229ENST00000489502 CIZ1Q9ULV3 898 aaPredicted RBP16.03■□□□□ 0.16
HLA-F-229ENST00000489502 COL4A3BPQ9Y5P4 624 aa16.03■□□□□ 0.16
HLA-F-229ENST00000489502 A0A087X0B3 334 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 ZBBXA8MT70 800 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 GAS2O43903 313 aaKnown RBP16.02■□□□□ 0.16
HLA-F-229ENST00000489502 CUTAO60888 179 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 FGBP02675 491 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 CD52P31358 61 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 TXLNAP40222 546 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 PLEKHG4Q58EX7 1191 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 AXDND1Q5T1B0 1012 aaPredicted RBP16.02■□□□□ 0.16
HLA-F-229ENST00000489502 CNKSR3Q6P9H4 555 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 SHC4Q6S5L8 630 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 TSHZ1Q6ZSZ6 1077 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 PRPF31Q8WWY3 499 aaKnown RBP16.02■□□□□ 0.16
HLA-F-229ENST00000489502 SPATA32Q96LK8 384 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 IFIH1Q9BYX4 1025 aaKnown RBP16.02■□□□□ 0.16
HLA-F-229ENST00000489502 POLD4Q9HCU8 107 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 BLOC1S4Q9NUP1 217 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 RCOR1Q9UKL0 485 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 PCDHA7Q9UN72 937 aa16.02■□□□□ 0.16
HLA-F-229ENST00000489502 A0A087WZ62 844 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 SLC26A4O43511 780 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 CSDE1O75534 798 aaKnown RBP16.01■□□□□ 0.15
HLA-F-229ENST00000489502 PLA2G4BP0C869 781 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 CRYBB1P53674 252 aaPredicted RBP16.01■□□□□ 0.15
HLA-F-229ENST00000489502 LAMTOR4Q0VGL1 99 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 PAK2Q13177 524 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 DHX8Q14562 1220 aaKnown RBP16.01■□□□□ 0.15
HLA-F-229ENST00000489502 TPRNQ4KMQ1 711 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 FAM102BQ5T8I3 360 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 FAM228AQ86W67 206 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 EXOC8Q8IYI6 725 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 TCP11Q8WWU5 503 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 SEPT8Q92599 483 aa16.01■□□□□ 0.15
HLA-F-229ENST00000489502 FDXACB1Q9BRP7 624 aaPredicted RBP16.01■□□□□ 0.15
HLA-F-229ENST00000489502 NOC2LQ9Y3T9 749 aaKnown RBP16.01■□□□□ 0.15
HLA-F-229ENST00000489502 ACTN1P12814 892 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 CYP11B2P19099 503 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 FGFR4P22455 802 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 GLRA2P23416 452 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 ARL2P36404 184 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 SLC12A3P55017 1021 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 RAD51AP2Q09MP3 1159 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 CAPSQ13938 189 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 MCM6Q14566 821 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 PDILTQ8N807 584 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 MCPH1Q8NEM0 835 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 BSNDQ8WZ55 320 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 HERVK_113Q902F9 699 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 RAD54LQ92698 747 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 PANK2Q9BZ23 570 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 CCDC39Q9UFE4 941 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 PADI3Q9ULW8 664 aa16■□□□□ 0.15
HLA-F-229ENST00000489502 GBF1Q92538 1859 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 MYH11P35749 1972 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 NPHP3-ACAD11A0A0J9YXS1 232 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 RPS6KA5O75582 802 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 SRGAP2CP0DJJ0 459 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 DARSP14868 501 aaKnown RBP15.99■□□□□ 0.15
HLA-F-229ENST00000489502 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
HLA-F-229ENST00000489502 NAALADL2Q58DX5 795 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 RASIP1Q5U651 963 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 FAM109BQ6ICB4 259 aaPredicted RBP15.99■□□□□ 0.15
HLA-F-229ENST00000489502 RINT1Q6NUQ1 792 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 ZNF410Q86VK4 478 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 GPBP1Q86WP2 473 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 SYT2Q8N9I0 419 aaPredicted RBP15.99■□□□□ 0.15
HLA-F-229ENST00000489502 RNF149Q8NC42 400 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 LINC01599Q8WXQ3 324 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 LARP4BQ92615 738 aaKnown RBP15.99■□□□□ 0.15
HLA-F-229ENST00000489502 ERVK-5Q9HDB9 667 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 CHMP5Q9NZZ3 219 aa15.99■□□□□ 0.15
HLA-F-229ENST00000489502 LRRIQ4A6NIV6 560 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms