RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
TRAIP-209ENST00000488860 SMARCE1Q969G3 411 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 MAP7D2Q96T17 732 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 C7orf25Q9BPX7 421 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 TIPINQ9BVW5 301 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 TRPV6Q9H1D0 765 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 ODF2LQ9ULJ1 636 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 ATP11BQ9Y2G3 1177 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 PCDHA2Q9Y5H9 948 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 MROH7Q68CQ1 1323 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 IGKV6-21A0A0C4DH24 114 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 SFI1A8K8P3 1242 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 TLR3O15455 904 aaKnown RBP13.64□□□□□ -0.23
TRAIP-209ENST00000488860 SMC2O95347 1197 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 VTNP04004 478 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
TRAIP-209ENST00000488860 MYL1P05976 194 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 RTP1P59025 263 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 ADAM17P78536 824 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 TMEM62Q0P6H9 643 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 DPYDQ12882 1025 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 COASYQ13057 564 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 IER5Q5VY09 327 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 SFR1Q86XK3 245 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 RHPN2Q8IUC4 686 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 SLC43A3Q8NBI5 491 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 ASAP3Q8TDY4 903 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 DNAJB3Q8WWF6 145 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 KIFAP3Q92845 792 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 CCDC47Q96A33 483 aaKnown RBP13.64□□□□□ -0.23
TRAIP-209ENST00000488860 DNAJC19Q96DA6 116 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 ZNF668Q96K58 619 aaPredicted RBP13.64□□□□□ -0.23
TRAIP-209ENST00000488860 NLRP4Q96MN2 994 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 SCLT1Q96NL6 688 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 SEZ6LQ9BYH1 1024 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 PDLIM7Q9NR12 457 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 EXOC1Q9NV70 894 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 PANK4Q9NVE7 773 aa13.64□□□□□ -0.23
TRAIP-209ENST00000488860 SUCLA2Q9P2R7 463 aaPredicted RBP13.64□□□□□ -0.23
TRAIP-209ENST00000488860 SCN5AQ14524 2016 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 SMIM35A0A1B0GVV1 85 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 LRRIQ4A6NIV6 560 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 CTSHP09668 335 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
TRAIP-209ENST00000488860 MAPK7Q13164 816 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
TRAIP-209ENST00000488860 LRRC26Q2I0M4 334 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 KMT5BQ4FZB7 885 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 UNC13DQ70J99 1090 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 SERINC5Q86VE9 423 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 FAM126BQ8IXS8 530 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 DAW1Q8N136 415 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 MYCT1Q8N699 235 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 LINC01465Q8N7H1 131 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 BSNDQ8WZ55 320 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 WNT8BQ93098 351 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 IFT74Q96LB3 600 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 PARVGQ9HBI0 331 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 TBC1D7Q9P0N9 293 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 COL4A3BPQ9Y5P4 624 aa13.63□□□□□ -0.23
TRAIP-209ENST00000488860 CCDC169A6NNP5 214 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 K7ENM7 598 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 M0QZ92 97 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 BIN1O00499 593 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 KLRC4O43908 158 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 GAP43P17677 238 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 GLRA2P23416 452 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 ARL2P36404 184 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 THPOP40225 353 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 CDK7P50613 346 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 PEX3P56589 373 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 PTK7Q13308 1070 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 DMP1Q13316 513 aaPredicted RBP13.62□□□□□ -0.23
TRAIP-209ENST00000488860 CAPSQ13938 189 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 HERC4Q5GLZ8 1057 aaPredicted RBP13.62□□□□□ -0.23
TRAIP-209ENST00000488860 ODR4Q5SWX8 454 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 CNNM4Q6P4Q7 775 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 RSPH3Q86UC2 560 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 KSR1Q8IVT5 923 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 ELOA2Q8IYF1 753 aaPredicted RBP13.62□□□□□ -0.23
TRAIP-209ENST00000488860 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
TRAIP-209ENST00000488860 NLRP7Q8WX94 980 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 DHX38Q92620 1227 aaKnown RBP13.62□□□□□ -0.23
TRAIP-209ENST00000488860 HPS3Q969F9 1004 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 CTAGE1Q96RT6 745 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 KIFC3Q9BVG8 833 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 GINS2Q9Y248 185 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 PCDHA5Q9Y5H7 936 aa13.62□□□□□ -0.23
TRAIP-209ENST00000488860 DCDC2CA8MYV0 355 aa13.61□□□□□ -0.23
TRAIP-209ENST00000488860 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
TRAIP-209ENST00000488860 PLS3P13797 630 aa13.61□□□□□ -0.23
TRAIP-209ENST00000488860 ZNF131P52739 623 aa13.61□□□□□ -0.23
TRAIP-209ENST00000488860 TLE2Q04725 743 aa13.61□□□□□ -0.23
TRAIP-209ENST00000488860 LAMTOR4Q0VGL1 99 aa13.61□□□□□ -0.23
TRAIP-209ENST00000488860 TFDP1Q14186 410 aa13.61□□□□□ -0.23
TRAIP-209ENST00000488860 MXD4Q14582 209 aaPredicted RBP13.61□□□□□ -0.23
TRAIP-209ENST00000488860 SNX17Q15036 470 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms