RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 KRT26Q7Z3Y9 468 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 PTRH1Q86Y79 214 aaKnown RBP4.58□□□□□ -1.68
CD46-215ENST00000488596 GPR135Q8IZ08 494 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 AHI1Q8N157 1196 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 CELF4Q9BZC1 486 aaKnown RBP4.58□□□□□ -1.68
CD46-215ENST00000488596 PCDH12Q9NPG4 1184 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 INCENPQ9NQS7 918 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 TLR9Q9NR96 1032 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 PLA2G3Q9NZ20 509 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 BTBD7Q9P203 1132 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 MAPRE3Q9UPY8 281 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 COL4A3BPQ9Y5P4 624 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 ATP23Q9Y6H3 246 aa4.58□□□□□ -1.68
CD46-215ENST00000488596 ZNF891A8MT65 544 aaPredicted RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 GSTA4O15217 222 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 C4BPAP04003 597 aaKnown RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 VIL1P09327 827 aaKnown RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 NCLP19338 710 aaKnown RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 POU3F3P20264 500 aaPredicted RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 STRN3Q13033 797 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 TUBA3CQ13748 450 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 EIF4HQ15056 248 aaKnown RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 PCOLCEQ15113 449 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 STILQ15468 1287 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 CT47A1Q5JQC4 288 aaPredicted RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 TRIM68Q6AZZ1 485 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 TUBA3EQ6PEY2 450 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 LRSAM1Q6UWE0 723 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 DDX46Q7L014 1031 aaKnown RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 CXXC5Q7LFL8 322 aaKnown RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 PPM1KQ8N3J5 372 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 C2orf69Q8N8R5 385 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 AMNQ9BXJ7 453 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 MMRN2Q9H8L6 949 aa4.57□□□□□ -1.68
CD46-215ENST00000488596 HECAQ9UBI9 543 aaPredicted RBP4.57□□□□□ -1.68
CD46-215ENST00000488596 A0A087X1B8 175 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 CBX4O00257 560 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 KRT37O76014 449 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 MPIG6BO95866 241 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 AOAHP28039 575 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 SOX5P35711 763 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 MRE11P49959 708 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 EVA1CP58658 441 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 LACTBP83111 547 aaPredicted RBP4.56□□□□□ -1.68
CD46-215ENST00000488596 CD83Q01151 205 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 SEC23AQ15436 765 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 OTOP2Q7RTS6 562 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 LDLRAD3Q86YD5 345 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 LARP4BQ92615 738 aaKnown RBP4.56□□□□□ -1.68
CD46-215ENST00000488596 AGO3Q9H9G7 860 aaKnown RBP4.56□□□□□ -1.68
CD46-215ENST00000488596 SMURF1Q9HCE7 757 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 UCKL1Q9NWZ5 548 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 CEP72Q9P209 647 aa4.56□□□□□ -1.68
CD46-215ENST00000488596 PTPDC1A2A3K4 754 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 PRAMEF25A6NGN4 478 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 ZNF561-AS1K7EIQ3 104 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 NPTXRO95502 500 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 IBSPP21815 317 aaPredicted RBP4.55□□□□□ -1.68
CD46-215ENST00000488596 GJA4P35212 333 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 ID4P47928 161 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 SCNN1BP51168 640 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 MECP2P51608 486 aaKnown RBP4.55□□□□□ -1.68
CD46-215ENST00000488596 INHBCP55103 352 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 HGFACQ04756 655 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 GRM7Q14831 915 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 FIGNQ5HY92 759 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 KANK2Q63ZY3 851 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 SPTY2D1Q68D10 685 aaPredicted RBP4.55□□□□□ -1.68
CD46-215ENST00000488596 FSTL4Q6MZW2 842 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 DDX42Q86XP3 938 aaKnown RBP eCLIP4.55□□□□□ -1.68
CD46-215ENST00000488596 CHST14Q8NCH0 376 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 GPR101Q96P66 508 aaPredicted RBP4.55□□□□□ -1.68
CD46-215ENST00000488596 BTBD2Q9BX70 525 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 OR10A2Q9H208 303 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 ZNF703Q9H7S9 590 aaPredicted RBP4.55□□□□□ -1.68
CD46-215ENST00000488596 CABP5Q9NP86 173 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 B4GALT6Q9UBX8 382 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 FBXO10Q9UK96 956 aa4.55□□□□□ -1.68
CD46-215ENST00000488596 hCG_2014768A0A024R1R8 64 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 A0A0G2JNJ9 132 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 SCDO00767 359 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 PPM1GO15355 546 aaPredicted RBP4.54□□□□□ -1.68
CD46-215ENST00000488596 CLASP2O75122 1294 aaKnown RBP4.54□□□□□ -1.68
CD46-215ENST00000488596 F2P00734 622 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 ZBTB48P10074 688 aaPredicted RBP4.54□□□□□ -1.68
CD46-215ENST00000488596 ATP2A2P16615 1042 aaKnown RBP4.54□□□□□ -1.68
CD46-215ENST00000488596 ECE1P42892 770 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 STAT5BP51692 787 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 HERVK_113P62684 666 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 IGBP1P78318 339 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 HNRNPA0Q13151 305 aaKnown RBP4.54□□□□□ -1.68
CD46-215ENST00000488596 MOGSQ13724 837 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 TMEM200BQ69YZ2 307 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 EP400NLQ6ZTU2 488 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 LHFPL2Q6ZUX7 228 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 ZNF627Q7L945 461 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 SGMS1Q86VZ5 419 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 AFAP1L2Q8N4X5 818 aa4.54□□□□□ -1.68
CD46-215ENST00000488596 OR14K1Q8NGZ2 314 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms