RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 XRN1Q8IZH2 1706 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 TSPAN1O60635 241 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 PEX14O75381 377 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 MYBP10242 640 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 PRLRP16471 622 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 KCNA6P17658 529 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 ECHS1P30084 290 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 HSD17B4P51659 736 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 C2orf54Q08AI8 447 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 TBL3Q12788 808 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 IRF5Q13568 498 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 GIT2Q14161 759 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 WDR72Q3MJ13 1102 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 PPP2R2DQ66LE6 453 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 FAM186BQ8IYM0 893 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 SNF8Q96H20 258 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 MYD88Q99836 296 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 PCDHA7Q9UN72 937 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 PLAAQ9Y263 795 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 TDRKHQ9Y2W6 561 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 COMMD10Q9Y6G5 202 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 TAF6LQ9Y6J9 622 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 SMIM31A0A1B0GVY4 71 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 SOBPA7XYQ1 873 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 GOLGA8TH3BQL2 631 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 ENPP3O14638 875 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 CYP21A2P08686 494 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 GOLGA8HP0CJ92 632 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 CLK1P49759 484 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 ZNF844Q08AG5 666 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 DCTN2Q13561 401 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 UAP1Q16222 522 aaPredicted RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 ZNF423Q2M1K9 1284 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 WASHC4Q2M389 1173 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 FASTKD5Q7L8L6 764 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 CADM3Q8N126 398 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 KCNH5Q8NCM2 988 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 FBF1Q8TES7 1133 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 C8orf48Q96LL4 319 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 HAUS7Q99871 368 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 C12orf10Q9HB07 376 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 USP29Q9HBJ7 922 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 NCOA5Q9HCD5 579 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 SNRKQ9NRH2 765 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 DIS3Q9Y2L1 958 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 NVLO15381 856 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 CHGBP05060 677 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 LACTBP83111 547 aaPredicted RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 DPYSQ14117 519 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 WASHC2DQ5SRD0 308 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 CHST3Q7LGC8 479 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 NLRP9Q7RTR0 991 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 ABTB1Q969K4 478 aaPredicted RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 GFM2Q969S9 779 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 OLFM3Q96PB7 478 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 LRMDAQ9H2I8 198 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 TLE6Q9H808 572 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 BACH1O14867 736 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 CETN3O15182 167 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 CHRNB1P11230 501 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 CDC27P30260 824 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 RGS2P41220 211 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 TUFMP49411 452 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 RBL2Q08999 1139 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 R3HDM1Q15032 1099 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 PROSER3Q2NL68 480 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 CDONQ4KMG0 1287 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 FAM133BQ5BKY9 247 aaKnown RBP6.84□□□□□ -1.31
SIK3-212ENST00000488337 SPOPLQ6IQ16 392 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 DCLRE1AQ6PJP8 1040 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.84□□□□□ -1.31
SIK3-212ENST00000488337 OR7G1Q8NGA0 311 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 SUN5Q8TC36 379 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 CERKQ8TCT0 537 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 MPP4Q96JB8 637 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 IL20Q9NYY1 176 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 STK39Q9UEW8 545 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 TBX22Q9Y458 520 aa6.84□□□□□ -1.31
SIK3-212ENST00000488337 CHD4Q14839 1912 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 MAP3K7O43318 606 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 MTA2O94776 668 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 AFPP02771 609 aaKnown RBP6.84□□□□□ -1.32
SIK3-212ENST00000488337 CCNCP24863 283 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 VHLP40337 213 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 RCN2Q14257 317 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 RASIP1Q5U651 963 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 RIBC1Q8N443 379 aaPredicted RBP6.84□□□□□ -1.32
SIK3-212ENST00000488337 LSMEM1Q8N8F7 131 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 BRSK1Q8TDC3 778 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.84□□□□□ -1.32
SIK3-212ENST00000488337 VPS50Q96JG6 964 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 CENPKQ9BS16 269 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 CEP44Q9C0F1 390 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 MTFR1LQ9H019 292 aa6.84□□□□□ -1.32
SIK3-212ENST00000488337 METTL14Q9HCE5 456 aaKnown RBP6.84□□□□□ -1.32
SIK3-212ENST00000488337 FER1L4A9Z1Z3 1794 aa6.83□□□□□ -1.32
SIK3-212ENST00000488337 ZNF185O15231 689 aa6.83□□□□□ -1.32
SIK3-212ENST00000488337 SNX3O60493 162 aa6.83□□□□□ -1.32
SIK3-212ENST00000488337 GYPCP04921 128 aa6.83□□□□□ -1.32
SIK3-212ENST00000488337 CES1P23141 567 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms