RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SCLT1Q96NL6 688 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 OSMRQ99650 979 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 JPH2Q9BR39 696 aaPredicted RBP12.29□□□□□ -0.44
UBE4B-210ENST00000488228 UBE2OQ9C0C9 1292 aaKnown RBP12.29□□□□□ -0.44
UBE4B-210ENST00000488228 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
UBE4B-210ENST00000488228 CDHR5Q9HBB8 845 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 IL23AQ9NPF7 189 aa12.29□□□□□ -0.44
UBE4B-210ENST00000488228 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
UBE4B-210ENST00000488228 SLC26A4O43511 780 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 GPR32O75388 356 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 RPLP2P05387 115 aaKnown RBP12.28□□□□□ -0.44
UBE4B-210ENST00000488228 PLA2G4BP0C869 781 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 RFC2P35250 354 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 DNM2P50570 870 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 GPC3P51654 580 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 NLRP11P59045 1033 aaKnown RBP12.28□□□□□ -0.44
UBE4B-210ENST00000488228 RAD51AP2Q09MP3 1159 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 MCM6Q14566 821 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 LPIN1Q14693 890 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 NAALADL2Q58DX5 795 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 FBXO47Q5MNV8 452 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 C9orf50Q5SZB4 431 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 IER5Q5VY09 327 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 RESP18Q5W5W9 173 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 C16orf59Q7L2K0 433 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 PSPC1Q8WXF1 523 aaKnown RBP12.28□□□□□ -0.44
UBE4B-210ENST00000488228 BSNDQ8WZ55 320 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 NLRP4Q96MN2 994 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.28□□□□□ -0.444e-7■□□□□ 9
UBE4B-210ENST00000488228 PANK2Q9BZ23 570 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 CELF4Q9BZC1 486 aaKnown RBP12.28□□□□□ -0.44
UBE4B-210ENST00000488228 POLD4Q9HCU8 107 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 CCDC39Q9UFE4 941 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
UBE4B-210ENST00000488228 KIAA1671Q9BY89 1806 aa12.27□□□□□ -0.44
UBE4B-210ENST00000488228 NPHP3-ACAD11A0A0J9YXS1 232 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 GAS2O43903 313 aaKnown RBP12.27□□□□□ -0.45
UBE4B-210ENST00000488228 CXCL10P02778 98 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 CYP11B2P19099 503 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 STAT6P42226 847 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 SLC12A3P55017 1021 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
UBE4B-210ENST00000488228 CAPSQ13938 189 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 FAM102BQ5T8I3 360 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 RRAGBQ5VZM2 374 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 PSRC1Q6PGN9 363 aaPredicted RBP12.27□□□□□ -0.45
UBE4B-210ENST00000488228 GPBP1Q86WP2 473 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 NME8Q8N427 588 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 MCPH1Q8NEM0 835 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 TCP11Q8WWU5 503 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 PRPF31Q8WWY3 499 aaKnown RBP12.27□□□□□ -0.45
UBE4B-210ENST00000488228 NLRP7Q8WX94 980 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 LARP4BQ92615 738 aaKnown RBP12.27□□□□□ -0.45
UBE4B-210ENST00000488228 ADAMTS10Q9H324 1103 aa12.27□□□□□ -0.45
UBE4B-210ENST00000488228 AGO3Q9H9G7 860 aaKnown RBP12.27□□□□□ -0.45
UBE4B-210ENST00000488228 LAMA3Q16787 3333 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 A0A087WZ62 844 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 HIP1RO75146 1068 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 CSDE1O75534 798 aaKnown RBP12.26□□□□□ -0.45
UBE4B-210ENST00000488228 PFKFB1P16118 471 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 FGFR4P22455 802 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 GLRA2P23416 452 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 CD52P31358 61 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 ARL2P36404 184 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 LAMTOR4Q0VGL1 99 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 MAPK7Q13164 816 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 PAK2Q13177 524 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 E2F4Q16254 413 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 TMEM240Q5SV17 173 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 RINT1Q6NUQ1 792 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 CCDC73Q6ZRK6 1079 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 TSHZ1Q6ZSZ6 1077 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 ZNF365Q70YC5 407 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 OTOP2Q7RTS6 562 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 EXOC8Q8IYI6 725 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 DAW1Q8N136 415 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 SYT2Q8N9I0 419 aaPredicted RBP12.26□□□□□ -0.45
UBE4B-210ENST00000488228 DHX58Q96C10 678 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 FDXACB1Q9BRP7 624 aaPredicted RBP12.26□□□□□ -0.45
UBE4B-210ENST00000488228 IFIH1Q9BYX4 1025 aaKnown RBP12.26□□□□□ -0.45
UBE4B-210ENST00000488228 PRO3102Q9H379 93 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 GOLPH3LQ9H4A5 285 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 STK17AQ9UEE5 414 aa12.26□□□□□ -0.45
UBE4B-210ENST00000488228 NOC2LQ9Y3T9 749 aaKnown RBP12.26□□□□□ -0.45
UBE4B-210ENST00000488228 NLRC5Q86WI3 1866 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 TTC3P53804 2025 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 A0A1B0GVL5 298 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 PARNO95453 639 aaKnown RBP12.25□□□□□ -0.45
UBE4B-210ENST00000488228 PFKMP08237 780 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 SRGAP2CP0DJJ0 459 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 CRYBB1P53674 252 aaPredicted RBP12.25□□□□□ -0.45
UBE4B-210ENST00000488228 SHHQ15465 462 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 PLEKHG4Q58EX7 1191 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 ADALQ6DHV7 355 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 CNKSR3Q6P9H4 555 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 C1orf186Q6ZWK4 172 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 ZNF410Q86VK4 478 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 FAM228AQ86W67 206 aa12.25□□□□□ -0.45
UBE4B-210ENST00000488228 RPUSD2Q8IZ73 545 aaKnown RBP12.25□□□□□ -0.45
UBE4B-210ENST00000488228 FSIP1Q8NA03 581 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms