RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 PLCB2Q00722 1185 aa19.04■□□□□ 0.64
HMG20B-212ENST00000487894 NFX1Q12986 1120 aaKnown RBP19.04■□□□□ 0.64
HMG20B-212ENST00000487894 XKR9Q5GH70 373 aa19.04■□□□□ 0.64
HMG20B-212ENST00000487894 OTUD6AQ7L8S5 288 aa19.04■□□□□ 0.64
HMG20B-212ENST00000487894 SLC7A3Q8WY07 619 aa19.04■□□□□ 0.64
HMG20B-212ENST00000487894 RC3H2Q9HBD1 1191 aaKnown RBP19.04■□□□□ 0.64
HMG20B-212ENST00000487894 TUFT1Q9NNX1 390 aa19.04■□□□□ 0.64
HMG20B-212ENST00000487894 BMP2KQ9NSY1 1161 aaPredicted RBP19.04■□□□□ 0.64
HMG20B-212ENST00000487894 INSL6Q9Y581 213 aa19.04■□□□□ 0.64
HMG20B-212ENST00000487894 PRUNE2Q8WUY3 3088 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 LINC01553A4QN01 128 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 LAD1O00515 517 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 GPR182O15218 404 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 FOSL2P15408 326 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 EIF4BP23588 611 aaKnown RBP19.03■□□□□ 0.64
HMG20B-212ENST00000487894 DNM2P50570 870 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 EMC2Q15006 297 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 ODR4Q5SWX8 454 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 CATSPER3Q86XQ3 398 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 NLRP7Q8WX94 980 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 POLR3CQ9BUI4 534 aaPredicted RBP19.03■□□□□ 0.64
HMG20B-212ENST00000487894 CERS4Q9HA82 394 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 ANKEF1Q9NU02 776 aa19.03■□□□□ 0.64
HMG20B-212ENST00000487894 SUCLA2Q9P2R7 463 aaPredicted RBP19.03■□□□□ 0.64
HMG20B-212ENST00000487894 A0A087WZ62 844 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 VPS37CA5D8V6 355 aaPredicted RBP19.02■□□□□ 0.64
HMG20B-212ENST00000487894 EPOPA6NHQ4 379 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 DARSP14868 501 aaKnown RBP19.02■□□□□ 0.64
HMG20B-212ENST00000487894 PDCP20941 246 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 PRPHP41219 470 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 RARRES1P49788 294 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 POTEGQ6S5H5 508 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 FAM43BQ6ZT52 329 aaPredicted RBP19.02■□□□□ 0.64
HMG20B-212ENST00000487894 RHPN2Q8IUC4 686 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 EXOC8Q8IYI6 725 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 CRIPAKQ8N1N5 446 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 IGSF22Q8N9C0 903 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 ERMNQ8TAM6 284 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 PIGOQ8TEQ8 1089 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 SCLT1Q96NL6 688 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 YME1L1Q96TA2 773 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 FDXACB1Q9BRP7 624 aaPredicted RBP19.02■□□□□ 0.64
HMG20B-212ENST00000487894 XPNPEP1Q9NQW7 623 aa19.02■□□□□ 0.64
HMG20B-212ENST00000487894 A0A087WWV3 80 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 GAS2O43903 313 aaKnown RBP19.01■□□□□ 0.63
HMG20B-212ENST00000487894 RPA1P27694 616 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 ATP2C1P98194 919 aaPredicted RBP19.01■□□□□ 0.63
HMG20B-212ENST00000487894 CDC42EP1Q00587 391 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 ADGRE1Q14246 886 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 DSC3Q14574 896 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 IL17AQ16552 155 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 HAUS3Q68CZ6 603 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 BRAPQ7Z569 592 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 ZNF410Q86VK4 478 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 KSR1Q8IVT5 923 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 TMEM143Q96AN5 459 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 GAS2L1Q99501 681 aaPredicted RBP19.01■□□□□ 0.63
HMG20B-212ENST00000487894 MTRQ99707 1265 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 RGS18Q9NS28 235 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 LRWD1Q9UFC0 647 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 COL4A3BPQ9Y5P4 624 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 MYH11P35749 1972 aa19.01■□□□□ 0.63
HMG20B-212ENST00000487894 SYT1P21579 422 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 FGFR4P22455 802 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 SARSP49591 514 aaKnown RBP19■□□□□ 0.63
HMG20B-212ENST00000487894 PDIA5Q14554 519 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 FERMT3Q86UX7 667 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 NPAS4Q8IUM7 802 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 PSPC1Q8WXF1 523 aaKnown RBP19■□□□□ 0.63
HMG20B-212ENST00000487894 ARNTL2Q8WYA1 636 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 ZNF689Q96CS4 500 aaPredicted RBP19■□□□□ 0.63
HMG20B-212ENST00000487894 NLRP4Q96MN2 994 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 CCDC43Q96MW1 224 aaKnown RBP19■□□□□ 0.63
HMG20B-212ENST00000487894 ADAM2Q99965 735 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 GCOM2Q9BZD3 368 aaPredicted RBP19■□□□□ 0.63
HMG20B-212ENST00000487894 ATP6V0A4Q9HBG4 840 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 ADGRA3Q8IWK6 1321 aa19■□□□□ 0.63
HMG20B-212ENST00000487894 DENND3A2RUS2 1198 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 C9IYK1 514 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 RFXAPO00287 272 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 CSDE1O75534 798 aaKnown RBP18.99■□□□□ 0.63
HMG20B-212ENST00000487894 DGAT1O75907 488 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 XRCC6P12956 609 aaKnown RBP eCLIP18.99■□□□□ 0.63
HMG20B-212ENST00000487894 MUTP22033 750 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 ERVK-21P61565 698 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 ECM1Q16610 540 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 HSCBQ8IWL3 235 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 TCP11Q8WWU5 503 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 PRPF31Q8WWY3 499 aaKnown RBP18.99■□□□□ 0.63
HMG20B-212ENST00000487894 TGS1Q96RS0 853 aaKnown RBP18.99■□□□□ 0.63
HMG20B-212ENST00000487894 RAB34Q9BZG1 259 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 C1orf112Q9NSG2 853 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 DBR1Q9UK59 544 aaKnown RBP18.99■□□□□ 0.63
HMG20B-212ENST00000487894 UNC80Q8N2C7 3258 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 PLXNA4Q9HCM2 1894 aa18.99■□□□□ 0.63
HMG20B-212ENST00000487894 PP2D1A8MPX8 630 aa18.98■□□□□ 0.63
HMG20B-212ENST00000487894 USO1O60763 962 aaKnown RBP18.98■□□□□ 0.63
HMG20B-212ENST00000487894 DGKIO75912 1065 aa18.98■□□□□ 0.63
HMG20B-212ENST00000487894 CCT6AP40227 531 aaKnown RBP18.98■□□□□ 0.63
HMG20B-212ENST00000487894 LAMTOR4Q0VGL1 99 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms