RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ST7Q9NRC1 585 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 FBXO28Q9NVF7 368 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 DIS3Q9Y2L1 958 aaKnown RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 LAMB4A4D0S4 1761 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 FMO5P49326 533 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 CDK17Q00537 523 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 DHX9Q08211 1270 aaKnown RBP12.75□□□□□ -0.37
TRA2B-214ENST00000487615 ZC2HC1CQ53FD0 456 aaPredicted RBP12.75□□□□□ -0.37
TRA2B-214ENST00000487615 AGBL3Q8NEM8 1001 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 COG1Q8WTW3 980 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 KIAA1586Q9HCI6 787 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 ATP8A1Q9Y2Q0 1164 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 THAP12O43422 761 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 IFNB1P01574 187 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 GPC5P78333 572 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 TTC31Q49AM3 519 aaPredicted RBP12.75□□□□□ -0.37
TRA2B-214ENST00000487615 DACT2Q5SW24 774 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 KRT39Q6A163 491 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 RINT1Q6NUQ1 792 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 PPP1R2P3Q6NXS1 205 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 APOBEC3FQ8IUX4 373 aaKnown RBP12.75□□□□□ -0.37
TRA2B-214ENST00000487615 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 ZNF384Q8TF68 577 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 RFFLQ8WZ73 363 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 MTMR9Q96QG7 549 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 FBXO40Q9UH90 709 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 PTPN22Q9Y2R2 807 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 TMX2Q9Y320 296 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 MAN1A1P33908 653 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 SWSAP1Q6NVH7 229 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 NUDT12Q9BQG2 462 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 ADPGKQ9BRR6 497 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 TIPINQ9BVW5 301 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
TRA2B-214ENST00000487615 MRPL47Q9HD33 250 aaKnown RBP12.75□□□□□ -0.37
TRA2B-214ENST00000487615 ROBO3Q96MS0 1386 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 NDC80O14777 642 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 DR1Q01658 176 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 EXOC8Q8IYI6 725 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 UHMK1Q8TAS1 419 aaKnown RBP12.74□□□□□ -0.37
TRA2B-214ENST00000487615 FMO2Q99518 471 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 SH2D3AQ9BRG2 576 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 MSTO1Q9BUK6 570 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 STK33Q9BYT3 514 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 LDHAP00338 332 aaKnown RBP12.74□□□□□ -0.37
TRA2B-214ENST00000487615 TMOD1P28289 359 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 ARHGAP25P42331 645 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 SLC8A3P57103 927 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 NNTQ13423 1086 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 LLGL1Q15334 1064 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 Q4G0T1 1027 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 TMEM119Q4V9L6 283 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 SGO2Q562F6 1265 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 AGBL1Q96MI9 1066 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 LACRTQ9GZZ8 138 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 UBE4BO95155 1302 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 ATF2P15336 505 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 CAP2P40123 477 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 BFSP1Q12934 665 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 GIT2Q14161 759 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 HADHQ16836 314 aaKnown RBP12.74□□□□□ -0.37
TRA2B-214ENST00000487615 EAPPQ56P03 285 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-214ENST00000487615 ZFPM1Q8IX07 1006 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 RPUSD2Q8IZ73 545 aaKnown RBP12.74□□□□□ -0.37
TRA2B-214ENST00000487615 PPP1R14CQ8TAE6 165 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 SAAL1Q96ER3 474 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 LRRC1Q9BTT6 524 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 APEX2Q9UBZ4 518 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 ESYT3A0FGR9 886 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 KLRC4O43908 158 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 HMGCS2P54868 508 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 IGBP1P78318 339 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-214ENST00000487615 MICALL2Q8IY33 904 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 SCFD1Q8WVM8 642 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.74□□□□□ -0.376e-10■■□□□ 11.8
TRA2B-214ENST00000487615 RUSC1Q9BVN2 902 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 KCNH7Q9NS40 1196 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 HOMER3Q9NSC5 361 aa12.74□□□□□ -0.37
TRA2B-214ENST00000487615 RSPH10B2B2RC85 870 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 ECEL1O95672 775 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 RSPH10BP0C881 870 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 BAATQ14032 418 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 KLHDC7AQ5VTJ3 777 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 CCDC89Q8N998 374 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 FAM213AQ9BRX8 229 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 USP54Q70EL1 1684 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 EVI5O60447 810 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 STAM2O75886 525 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 TBC1D8O95759 1140 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 DPEP1P16444 411 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 GGCXP38435 758 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 RWDD2BP57060 319 aa12.73□□□□□ -0.37
TRA2B-214ENST00000487615 TFAMQ00059 246 aaKnown RBP12.73□□□□□ -0.37
TRA2B-214ENST00000487615 NAB2Q15742 525 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms