RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 IBSPP21815 317 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-204ENST00000487252 HOXA13P31271 388 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-204ENST00000487252 CLCN4P51793 760 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-204ENST00000487252 KRT76Q01546 638 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 HTR4Q13639 388 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 DSC3Q14574 896 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 TSSK4Q6SA08 328 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 CYP26C1Q6V0L0 522 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 SIRT2Q8IXJ6 389 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 NME8Q8N427 588 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 CELF5Q8N6W0 485 aaKnown RBP13.5□□□□□ -0.25
TRIM56-204ENST00000487252 TMEM40Q8WWA1 233 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 AUTS2Q8WXX7 1259 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 UNC79Q9P2D8 2635 aa13.49□□□□□ -0.25
TRIM56-204ENST00000487252 MYH15Q9Y2K3 1946 aa13.49□□□□□ -0.25
TRIM56-204ENST00000487252 GSTTP1A0A1W2PQM5 241 aa13.49□□□□□ -0.25
TRIM56-204ENST00000487252 INSRRP14616 1297 aa13.49□□□□□ -0.25
TRIM56-204ENST00000487252 GBP2P32456 591 aaPredicted RBP13.49□□□□□ -0.25
TRIM56-204ENST00000487252 RPS9P46781 194 aaKnown RBP13.49□□□□□ -0.25
TRIM56-204ENST00000487252 PRKCQQ04759 706 aa13.49□□□□□ -0.25
TRIM56-204ENST00000487252 STAMQ92783 540 aa13.49□□□□□ -0.25
TRIM56-204ENST00000487252 ST3GAL5Q9UNP4 418 aa13.49□□□□□ -0.25
TRIM56-204ENST00000487252 LAMA5O15230 3695 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 CLUHO75153 1309 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 SMIM35A0A1B0GVV1 85 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-204ENST00000487252 RPS6KA5O75582 802 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 LAMP2P13473 410 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 KCNA4P22459 653 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 MARK3P27448 753 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 FZD5Q13467 585 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 SOWAHCQ53LP3 525 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-204ENST00000487252 IL31Q6EBC2 164 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 RSPO2Q6UXX9 243 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-204ENST00000487252 MAMSTRQ6ZN01 415 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 DDX53Q86TM3 631 aaKnown RBP13.48□□□□□ -0.25
TRIM56-204ENST00000487252 TMEM173Q86WV6 379 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-204ENST00000487252 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-204ENST00000487252 AMNQ9BXJ7 453 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 CDHR5Q9HBB8 845 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 LTB4R2Q9NPC1 389 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 RAB23Q9ULC3 237 aa13.48□□□□□ -0.25
TRIM56-204ENST00000487252 FAM170BA6NMN3 283 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 GPR182O15218 404 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 IGBP1P78318 339 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 GPC5P78333 572 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 SP4Q02446 784 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 SNW1Q13573 536 aaKnown RBP13.47□□□□□ -0.25
TRIM56-204ENST00000487252 LPAL2Q16609 132 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 CLLU1OSQ5K130 101 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 ZMYM1Q5SVZ6 1142 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 ODR4Q5SWX8 454 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 GATA6Q92908 595 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 MYL10Q9BUA6 226 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 RXFP3Q9NSD7 469 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.47□□□□□ -0.254e-8■■□□□ 14.4
TRIM56-204ENST00000487252 NUMBLQ9Y6R0 609 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 GREB1Q4ZG55 1949 aa13.47□□□□□ -0.25
TRIM56-204ENST00000487252 FREM2Q5SZK8 3169 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 LILRB3O75022 631 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 KCNK5O95279 499 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 CA8P35219 290 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 ALDH7A1P49419 539 aaKnown RBP13.46□□□□□ -0.25
TRIM56-204ENST00000487252 BCAR1P56945 870 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 UBXN2BQ14CS0 331 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 MLF2Q15773 248 aaPredicted RBP13.46□□□□□ -0.25
TRIM56-204ENST00000487252 ASPRV1Q53RT3 343 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 FTSJ3Q8IY81 847 aaKnown RBP13.46□□□□□ -0.25
TRIM56-204ENST00000487252 TMEM87AQ8NBN3 555 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
TRIM56-204ENST00000487252 KLHL5Q96PQ7 755 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 RPP25Q9BUL9 199 aaKnown RBP13.46□□□□□ -0.25
TRIM56-204ENST00000487252 LAMA1P25391 3075 aa13.46□□□□□ -0.25
TRIM56-204ENST00000487252 GCOM1H8Y6P7 765 aaPredicted RBP13.45□□□□□ -0.26
TRIM56-204ENST00000487252 POLR2MP0CAP2 368 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 KCNA2P16389 499 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 METAP2P50579 478 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRIM56-204ENST00000487252 NRLP54845 237 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 ALX1Q15699 326 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 SLC44A4Q53GD3 710 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 ZBTB41Q5SVQ8 909 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 DGKHQ86XP1 1220 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 PCYT2Q99447 389 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 VN1R3Q9BXE9 311 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 RTEL1Q9NZ71 1219 aa13.45□□□□□ -0.26
TRIM56-204ENST00000487252 CCDC195A0A1B0GUA6 201 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 ATP9AO75110 1047 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 HMMRO75330 724 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 CNPP09543 421 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms