RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 TTC38Q5R3I4 469 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 TRMT1LQ7Z2T5 733 aaKnown RBP13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 HSCBQ8IWL3 235 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 TTC12Q9H892 705 aaPredicted RBP13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 CLDND1Q9NY35 253 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 TECTAO75443 2155 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 COL1A2P08123 1366 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 ATG2AQ2TAZ0 1938 aa13.45□□□□□ -0.26
HLA-DOA-204ENST00000485901 IGSF9BQ9UPX0 1349 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 EML1O00423 815 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 WNT7AO00755 349 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 MAGEB2O15479 319 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 ZNF862O60290 1169 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 DGKIO75912 1065 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 EYA4O95677 639 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 P4HBP07237 508 aaKnown RBP13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 CTSHP09668 335 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 TXKP42681 527 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 QARSP47897 775 aaKnown RBP13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 PSMC5P62195 406 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 IER5Q5VY09 327 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 MTHFD1LQ6UB35 978 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 RUFY4Q6ZNE9 571 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 TSHZ1Q6ZSZ6 1077 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 CMTR2Q8IYT2 770 aaKnown RBP13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 NME8Q8N427 588 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 CACNA1HO95180 2353 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 ZDBF2Q9HCK1 2354 aa13.44□□□□□ -0.26
HLA-DOA-204ENST00000485901 SMIM35A0A1B0GVV1 85 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 MBTPS2O43462 519 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 OATP04181 439 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 STAG3L1P0CL83 205 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 PRKCEQ02156 737 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 ADAM15Q13444 863 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 UGCGQ16739 394 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 RILPL1Q5EBL4 403 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 FBXO47Q5MNV8 452 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 NCAPH2Q6IBW4 605 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 CRIPAKQ8N1N5 446 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 TRAPPC12Q8WVT3 735 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 DNAJB3Q8WWF6 145 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 NIFKQ9BYG3 293 aaKnown RBP13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
HLA-DOA-204ENST00000485901 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 DDX11L8A8MPP1 907 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 ZBTB42B2RXF5 422 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 M0QZ92 97 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 OR52Z1P0C646 297 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 IRS1P35568 1242 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 TOB1P50616 345 aaPredicted RBP13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 NHLH1Q02575 133 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 UBE3AQ05086 875 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 SPIRE1Q08AE8 756 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 HYAL1Q12794 435 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 BTG3Q14201 252 aaPredicted RBP13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 LPIN1Q14693 890 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 ODR4Q5SWX8 454 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 ALYREFQ86V81 257 aaKnown RBP13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 NPAS4Q8IUM7 802 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 ZBTB10Q96DT7 871 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 FAM49AQ9H0Q0 323 aaPredicted RBP13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 ZSWIM4Q9H7M6 989 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 CD207Q9UJ71 328 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 PLAGL2Q9UPG8 496 aa13.42□□□□□ -0.26
HLA-DOA-204ENST00000485901 LOXHD1Q8IVV2 1947 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 GRM6O15303 877 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 HSP90AA1P07900 732 aaKnown RBP13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 GHRP10912 638 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 TMOD1P28289 359 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 TECP42680 631 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 MRE11P49959 708 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 COASYQ13057 564 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 PDE12Q6L8Q7 609 aaKnown RBP13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 OTUD6AQ7L8S5 288 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 TPH2Q8IWU9 490 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 C4orf19Q8IY42 314 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 KIAA0319LQ8IZA0 1049 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 METTL13Q8N6R0 699 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 EFHBQ8N7U6 833 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 EDAQ92838 391 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 FBXL18Q96ME1 805 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 HSD17B14Q9BPX1 270 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 EIF2AK1Q9BQI3 630 aaKnown RBP13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 OSBPL7Q9BZF2 842 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 RGL1Q9NZL6 768 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 SEPT9Q9UHD8 586 aaPredicted RBP13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 PCDHB6Q9Y5E3 794 aa13.41□□□□□ -0.26
HLA-DOA-204ENST00000485901 VPS37CA5D8V6 355 aaPredicted RBP13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 LAD1O00515 517 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 SLITRK3O94933 977 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 STBD1O95210 358 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 C22orf31O95567 290 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 SYT1P21579 422 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 MRPS6P82932 125 aaKnown RBP13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 TBC1D8BQ0IIM8 1120 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 PTGDRQ13258 359 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 NBR1Q14596 966 aa13.4□□□□□ -0.26
HLA-DOA-204ENST00000485901 CBX2Q14781 532 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms