RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 C1orf112Q9NSG2 853 aa13.96□□□□□ -0.17
PTCD1-205ENST00000485746 LRWD1Q9UFC0 647 aa13.96□□□□□ -0.17
PTCD1-205ENST00000485746 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
PTCD1-205ENST00000485746 A0A087WWV3 80 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 A0A087WZ62 844 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 IGKV6-21A0A0C4DH24 114 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 LINC01553A4QN01 128 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 RFXAPO00287 272 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 LAD1O00515 517 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 GAS2O43903 313 aaKnown RBP13.95□□□□□ -0.18
PTCD1-205ENST00000485746 ARHGEF15O94989 841 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 LYPLA2O95372 231 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 SRGAP2CP0DJJ0 459 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 DARSP14868 501 aaKnown RBP13.95□□□□□ -0.18
PTCD1-205ENST00000485746 FGFR4P22455 802 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 SARSP49591 514 aaKnown RBP13.95□□□□□ -0.18
PTCD1-205ENST00000485746 HTRA4P83105 476 aaPredicted RBP13.95□□□□□ -0.18
PTCD1-205ENST00000485746 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
PTCD1-205ENST00000485746 BTG3Q14201 252 aaPredicted RBP13.95□□□□□ -0.18
PTCD1-205ENST00000485746 RTN4RL1Q86UN2 441 aaPredicted RBP13.95□□□□□ -0.18
PTCD1-205ENST00000485746 ZNF410Q86VK4 478 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 NPAS4Q8IUM7 802 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 LINC01599Q8WXQ3 324 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 NACC1Q96RE7 527 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 CEP89Q96ST8 783 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 FDXACB1Q9BRP7 624 aaPredicted RBP13.95□□□□□ -0.18
PTCD1-205ENST00000485746 POLR3CQ9BUI4 534 aaPredicted RBP13.95□□□□□ -0.18
PTCD1-205ENST00000485746 TMX1Q9H3N1 280 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 ATP6V0A4Q9HBG4 840 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 COL4A3BPQ9Y5P4 624 aa13.95□□□□□ -0.18
PTCD1-205ENST00000485746 TET1Q8NFU7 2136 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 ASAP2O43150 1006 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 MED24O75448 989 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 CSDE1O75534 798 aaKnown RBP13.94□□□□□ -0.18
PTCD1-205ENST00000485746 XRCC6P12956 609 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTCD1-205ENST00000485746 SFPQP23246 707 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTCD1-205ENST00000485746 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTCD1-205ENST00000485746 PDIA5Q14554 519 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 CCDC85BQ15834 202 aaPredicted RBP13.94□□□□□ -0.18
PTCD1-205ENST00000485746 KRT79Q5XKE5 535 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 SLC24A5Q71RS6 500 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 MAEAQ7L5Y9 396 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 CATSPER4Q7RTX7 472 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 CATSPER3Q86XQ3 398 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 KSR1Q8IVT5 923 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 C4orf32Q8N8J7 132 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 SLC17A8Q8NDX2 589 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 FBXO22Q8NEZ5 403 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 PRPF31Q8WWY3 499 aaKnown RBP13.94□□□□□ -0.18
PTCD1-205ENST00000485746 INTS4Q96HW7 963 aaKnown RBP13.94□□□□□ -0.18
PTCD1-205ENST00000485746 SAMD11Q96NU1 681 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 DHX33Q9H6R0 707 aaKnown RBP13.94□□□□□ -0.18
PTCD1-205ENST00000485746 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.94□□□□□ -0.18
PTCD1-205ENST00000485746 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
PTCD1-205ENST00000485746 ARHGEF35A5YM69 484 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 MGEA5O60502 916 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 USO1O60763 962 aaKnown RBP13.93□□□□□ -0.18
PTCD1-205ENST00000485746 DGAT1O75907 488 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 SPATA31C1P0DKV0 1188 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 RPA1P27694 616 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 ERVK-21P61565 698 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 LAMTOR4Q0VGL1 99 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 TFDP1Q14186 410 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 ZRSR1Q15695 479 aaKnown RBP13.93□□□□□ -0.18
PTCD1-205ENST00000485746 PAN2Q504Q3 1202 aaKnown RBP13.93□□□□□ -0.18
PTCD1-205ENST00000485746 SPOUT1Q5T280 376 aaKnown RBP13.93□□□□□ -0.18
PTCD1-205ENST00000485746 BRAPQ7Z569 592 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 SNX29Q8TEQ0 813 aa13.93□□□□□ -0.18
PTCD1-205ENST00000485746 EPOPA6NHQ4 379 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 MUTP22033 750 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 PRPHP41219 470 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 PHKA2P46019 1235 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 RARRES1P49788 294 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 NCBP1Q09161 790 aaKnown RBP13.92□□□□□ -0.18
PTCD1-205ENST00000485746 ADGRE1Q14246 886 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 MXD4Q14582 209 aaPredicted RBP13.92□□□□□ -0.18
PTCD1-205ENST00000485746 SKIV2LQ15477 1246 aaKnown RBP13.92□□□□□ -0.18
PTCD1-205ENST00000485746 FAM102BQ5T8I3 360 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 POTEGQ6S5H5 508 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 SPRED2Q7Z698 418 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 TMEM192Q8IY95 271 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 RNF149Q8NC42 400 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
PTCD1-205ENST00000485746 SNX21Q969T3 373 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 C17orf80Q9BSJ5 609 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 DACT1Q9NYF0 836 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 DBR1Q9UK59 544 aaKnown RBP13.92□□□□□ -0.18
PTCD1-205ENST00000485746 PIN4Q9Y237 131 aaKnown RBP13.92□□□□□ -0.18
PTCD1-205ENST00000485746 RWDD3Q9Y3V2 267 aa13.92□□□□□ -0.18
PTCD1-205ENST00000485746 MYH9P35579 1960 aaKnown RBP13.92□□□□□ -0.18
PTCD1-205ENST00000485746 ADGRA3Q8IWK6 1321 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 VWA3AA6NCI4 1184 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 TBKBP1A7MCY6 615 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 C9IYK1 514 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 DGKIO75912 1065 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 BMP15O95972 392 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 SYT1P21579 422 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms