RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TBCAO75347 108 aaKnown RBP19.47■□□□□ 0.71
CHMP3-207ENST00000485465 FAM13AO94988 1023 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 RPN1P04843 607 aaKnown RBP19.47■□□□□ 0.71
CHMP3-207ENST00000485465 IDEP14735 1019 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 CLCN3P51790 818 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 ATN1P54259 1190 aaPredicted RBP19.47■□□□□ 0.71
CHMP3-207ENST00000485465 DRP2Q13474 957 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 PTGISQ16647 500 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 RUFY4Q6ZNE9 571 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 UNC13DQ70J99 1090 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 CCDC65Q8IXS2 484 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 KIAA0319LQ8IZA0 1049 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 SPATA20Q8TB22 786 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 SMARCE1Q969G3 411 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 CTAGE1Q96RT6 745 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 TRMT13Q9NUP7 481 aaKnown RBP19.47■□□□□ 0.71
CHMP3-207ENST00000485465 PANK4Q9NVE7 773 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 KIAA1468Q9P260 1216 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 SUCLA2Q9P2R7 463 aaPredicted RBP19.47■□□□□ 0.71
CHMP3-207ENST00000485465 PCDHA5Q9Y5H7 936 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 COL4A3BPQ9Y5P4 624 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 SFI1A8K8P3 1242 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 SARSP49591 514 aaKnown RBP19.46■□□□□ 0.71
CHMP3-207ENST00000485465 ZNF131P52739 623 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 RTP1P59025 263 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 SNX17Q15036 470 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 C1orf53Q5VUE5 145 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 TAF2Q6P1X5 1199 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 SERINC5Q86VE9 423 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 PRPF31Q8WWY3 499 aaKnown RBP19.46■□□□□ 0.71
CHMP3-207ENST00000485465 PSPC1Q8WXF1 523 aaKnown RBP19.46■□□□□ 0.71
CHMP3-207ENST00000485465 TRPV6Q9H1D0 765 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 ZHX3Q9H4I2 956 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 PARVGQ9HBI0 331 aa19.46■□□□□ 0.71
CHMP3-207ENST00000485465 B4GALT4O60513 344 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 PLS3P13797 630 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 GAP43P17677 238 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 COASYQ13057 564 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 PTK7Q13308 1070 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 KMT5BQ4FZB7 885 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 NT5DC1Q5TFE4 455 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 RBM43Q6ZSC3 357 aaKnown RBP19.45■□□□□ 0.7
CHMP3-207ENST00000485465 UBE2Q1Q7Z7E8 422 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 MYCT1Q8N699 235 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 ASAP3Q8TDY4 903 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 GSDMAQ96QA5 445 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 MAP7D2Q96T17 732 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 FAM49AQ9H0Q0 323 aaPredicted RBP19.45■□□□□ 0.7
CHMP3-207ENST00000485465 NOD1Q9Y239 953 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 MROH7Q68CQ1 1323 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 BRCA2P51587 3418 aa19.45■□□□□ 0.7
CHMP3-207ENST00000485465 ASAP2O43150 1006 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 GLRA2P23416 452 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 LAMTOR4Q0VGL1 99 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 MXD4Q14582 209 aaPredicted RBP19.44■□□□□ 0.7
CHMP3-207ENST00000485465 KCNB1Q14721 858 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 HERC4Q5GLZ8 1057 aaPredicted RBP19.44■□□□□ 0.7
CHMP3-207ENST00000485465 ANKRD33Q7Z3H0 272 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 FAM126BQ8IXS8 530 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 NME8Q8N427 588 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 DNAJB3Q8WWF6 145 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 BSNDQ8WZ55 320 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 CCDC47Q96A33 483 aaKnown RBP19.44■□□□□ 0.7
CHMP3-207ENST00000485465 IFT74Q96LB3 600 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 C17orf75Q9HAS0 396 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 EXOC1Q9NV70 894 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 RMND1Q9NWS8 449 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 LARSQ9P2J5 1176 aaKnown RBP19.44■□□□□ 0.7
CHMP3-207ENST00000485465 SEL1LQ9UBV2 794 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 AKT3Q9Y243 479 aa19.44■□□□□ 0.7
CHMP3-207ENST00000485465 KAT6AQ92794 2004 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 RHOBTB3O94955 611 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 CD4P01730 458 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 PEX3P56589 373 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 EHHADHQ08426 723 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 ODR4Q5SWX8 454 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 RPAINQ86UA6 219 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 SFR1Q86XK3 245 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 RHPN2Q8IUC4 686 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 WNT8BQ93098 351 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 MAN1B1Q9UKM7 699 aa19.43■□□□□ 0.7
CHMP3-207ENST00000485465 TLR3O15455 904 aaKnown RBP19.42■□□□□ 0.7
CHMP3-207ENST00000485465 PQBP1O60828 265 aaKnown RBP19.42■□□□□ 0.7
CHMP3-207ENST00000485465 LETM1O95202 739 aaPredicted RBP19.42■□□□□ 0.7
CHMP3-207ENST00000485465 VTNP04004 478 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 RPLP2P05387 115 aaKnown RBP19.42■□□□□ 0.7
CHMP3-207ENST00000485465 NPTX2P47972 431 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 PSMD2Q13200 908 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 DMP1Q13316 513 aaPredicted RBP19.42■□□□□ 0.7
CHMP3-207ENST00000485465 PPP2R5AQ15172 486 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 LRRC26Q2I0M4 334 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 TRIM60Q495X7 471 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 RSPH3Q86UC2 560 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 KSR1Q8IVT5 923 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 TNS4Q8IZW8 715 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 SPIRE2Q8WWL2 714 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 DHX38Q92620 1227 aaKnown RBP19.42■□□□□ 0.7
CHMP3-207ENST00000485465 TOX2Q96NM4 488 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 KCNG1Q9UIX4 513 aa19.42■□□□□ 0.7
CHMP3-207ENST00000485465 CCDC85CA6NKD9 419 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms