RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 PRDM12Q9H4Q4 367 aa18.11■□□□□ 0.49
DDR1-246ENST00000485023 DHX33Q9H6R0 707 aaKnown RBP18.11■□□□□ 0.49
DDR1-246ENST00000485023 MTUS1Q9ULD2 1270 aa18.11■□□□□ 0.49
DDR1-246ENST00000485023 A0A087WZ62 844 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 LAD1O00515 517 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 MGEA5O60502 916 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 USO1O60763 962 aaKnown RBP18.1■□□□□ 0.49
DDR1-246ENST00000485023 CDC25AP30304 524 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 RARRES1P49788 294 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 ATP2C1P98194 919 aaPredicted RBP18.1■□□□□ 0.49
DDR1-246ENST00000485023 TAP1Q03518 808 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 RESTQ13127 1097 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 ZRSR1Q15695 479 aaKnown RBP18.1■□□□□ 0.49
DDR1-246ENST00000485023 HAUS3Q68CZ6 603 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 MAEAQ7L5Y9 396 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 RTN4RL1Q86UN2 441 aaPredicted RBP18.1■□□□□ 0.49
DDR1-246ENST00000485023 TOP1MTQ969P6 601 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 YME1L1Q96TA2 773 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 RAD9AQ99638 391 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 MTRQ99707 1265 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 FDXACB1Q9BRP7 624 aaPredicted RBP18.1■□□□□ 0.49
DDR1-246ENST00000485023 POLR3CQ9BUI4 534 aaPredicted RBP18.1■□□□□ 0.49
DDR1-246ENST00000485023 FTHL17Q9BXU8 183 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 ANKEF1Q9NU02 776 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 MTMR6Q9Y217 621 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 LOXHD1Q8IVV2 1947 aa18.1■□□□□ 0.49
DDR1-246ENST00000485023 DENND3A2RUS2 1198 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 VWA3AA6NCI4 1184 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 GPR182O15218 404 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 DARSP14868 501 aaKnown RBP18.09■□□□□ 0.49
DDR1-246ENST00000485023 EIF4BP23588 611 aaKnown RBP18.09■□□□□ 0.49
DDR1-246ENST00000485023 RPA1P27694 616 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 ECM1Q16610 540 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 FOXD4L5Q5VV16 416 aaPredicted RBP18.09■□□□□ 0.49
DDR1-246ENST00000485023 IGSF22Q8N9C0 903 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 PRPF31Q8WWY3 499 aaKnown RBP18.09■□□□□ 0.49
DDR1-246ENST00000485023 PSPC1Q8WXF1 523 aaKnown RBP18.09■□□□□ 0.49
DDR1-246ENST00000485023 FOXD4L4Q8WXT5 416 aaPredicted RBP18.09■□□□□ 0.49
DDR1-246ENST00000485023 ARNTL2Q8WYA1 636 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 ADAM2Q99965 735 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 RAB34Q9BZG1 259 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 ATP6V0A4Q9HBG4 840 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 XPNPEP1Q9NQW7 623 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 PPME1Q9Y570 386 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 COL4A3BPQ9Y5P4 624 aa18.09■□□□□ 0.49
DDR1-246ENST00000485023 STX6O43752 255 aa18.08■□□□□ 0.48
DDR1-246ENST00000485023 SRGAP2CP0DJJ0 459 aa18.08■□□□□ 0.48
DDR1-246ENST00000485023 FOSL2P15408 326 aa18.08■□□□□ 0.48
DDR1-246ENST00000485023 PRPHP41219 470 aa18.08■□□□□ 0.48
DDR1-246ENST00000485023 SF3A1Q15459 793 aaKnown RBP18.08■□□□□ 0.48
DDR1-246ENST00000485023 TCP11Q8WWU5 503 aa18.08■□□□□ 0.48
DDR1-246ENST00000485023 NACC1Q96RE7 527 aa18.08■□□□□ 0.48
DDR1-246ENST00000485023 GCOM2Q9BZD3 368 aaPredicted RBP18.08■□□□□ 0.48
DDR1-246ENST00000485023 TSPYL2Q9H2G4 693 aaPredicted RBP18.08■□□□□ 0.48
DDR1-246ENST00000485023 CDH23Q9H251 3354 aa18.08■□□□□ 0.48
DDR1-246ENST00000485023 RFXAPO00287 272 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 DGAT1O75907 488 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 HTRA4P83105 476 aaPredicted RBP18.07■□□□□ 0.48
DDR1-246ENST00000485023 CEBPZQ03701 1054 aaKnown RBP18.07■□□□□ 0.48
DDR1-246ENST00000485023 LAMTOR4Q0VGL1 99 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 ODR4Q5SWX8 454 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 KRT79Q5XKE5 535 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 EXOC8Q8IYI6 725 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 GPRC5CQ9NQ84 441 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 DDX19AQ9NUU7 478 aaKnown RBP18.07■□□□□ 0.48
DDR1-246ENST00000485023 KIAA1024Q9UPX6 916 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 INSL6Q9Y581 213 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 CLIC4Q9Y696 253 aa18.07■□□□□ 0.48
DDR1-246ENST00000485023 LINC01553A4QN01 128 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 ARHGEF35A5YM69 484 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 EPOPA6NHQ4 379 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 GATMP50440 423 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 PDIA5Q14554 519 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 PAN2Q504Q3 1202 aaKnown RBP18.06■□□□□ 0.48
DDR1-246ENST00000485023 ZNF410Q86VK4 478 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 ZNF710Q8N1W2 664 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 RNF149Q8NC42 400 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 ASAP3Q8TDY4 903 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 PLIN2Q99541 437 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 POLR3FQ9H1D9 316 aaPredicted RBP18.06■□□□□ 0.48
DDR1-246ENST00000485023 DBR1Q9UK59 544 aaKnown RBP18.06■□□□□ 0.48
DDR1-246ENST00000485023 LRFN2Q9ULH4 789 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 STXBP5LQ9Y2K9 1186 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 CHD9Q3L8U1 2897 aa18.06■□□□□ 0.48
DDR1-246ENST00000485023 E9PMD0 336 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 GAS2O43903 313 aaKnown RBP18.05■□□□□ 0.48
DDR1-246ENST00000485023 IGFBP4P22692 258 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 SFPQP23246 707 aaKnown RBP eCLIP18.05■□□□□ 0.48
DDR1-246ENST00000485023 CDC42EP1Q00587 391 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 FAM102BQ5T8I3 360 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 PADI6Q6TGC4 694 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 CATSPER4Q7RTX7 472 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 NPAS4Q8IUM7 802 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 GAS2L1Q99501 681 aaPredicted RBP18.05■□□□□ 0.48
DDR1-246ENST00000485023 C17orf80Q9BSJ5 609 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 BHMT2Q9H2M3 363 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 IFT122Q9HBG6 1241 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 RGS18Q9NS28 235 aa18.05■□□□□ 0.48
DDR1-246ENST00000485023 ADGRA3Q8IWK6 1321 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms